RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 H0Y626 953 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 HPRP00739 348 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 GALTP07902 379 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 CD247P20963 164 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 CA5AP35218 305 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 HMGCS1Q01581 520 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 CBX2Q14781 532 aaPredicted RBP24.83■■□□□ 1.56
C9orf40-201ENST00000376854 BROXQ5VW32 411 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 SULT1C3Q6IMI6 304 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 NECAB2Q7Z6G3 386 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 THAP5Q7Z6K1 395 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 CARNMT1Q8N4J0 409 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 DPY30Q9C005 99 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 RNF38Q9H0F5 515 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 FARSBQ9NSD9 589 aaKnown RBP24.83■■□□□ 1.56
C9orf40-201ENST00000376854 IRAK4Q9NWZ3 460 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 OPTCQ9UBM4 332 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 GNPTGQ9UJJ9 305 aa24.83■■□□□ 1.56
C9orf40-201ENST00000376854 TRIM16O95361 564 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 ALDH1A1P00352 501 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 CST1P01037 141 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 MATN1P21941 496 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 RPS3P23396 243 aaKnown RBP eCLIP24.82■■□□□ 1.56
C9orf40-201ENST00000376854 IST1P53990 364 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 MAD2L1Q13257 205 aaPredicted RBP24.82■■□□□ 1.56
C9orf40-201ENST00000376854 NKG7Q16617 165 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 INO80DQ53TQ3 878 aaPredicted RBP24.82■■□□□ 1.56
C9orf40-201ENST00000376854 C8orf59Q8N0T1 100 aaPredicted RBP24.82■■□□□ 1.56
C9orf40-201ENST00000376854 TBC1D15Q8TC07 691 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 AURKBQ96GD4 344 aaPredicted RBP24.82■■□□□ 1.56
C9orf40-201ENST00000376854 ADNPQ9H2P0 1102 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 IKZF5Q9H5V7 419 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 ZFP14Q9HCL3 533 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 WWOXQ9NZC7 414 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 DNAJB9Q9UBS3 223 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 KLQ9UEF7 1012 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 PRSS21Q9Y6M0 314 aa24.82■■□□□ 1.56
C9orf40-201ENST00000376854 SLC25A14O95258 325 aaPredicted RBP24.81■■□□□ 1.56
C9orf40-201ENST00000376854 TUFMP49411 452 aaKnown RBP24.81■■□□□ 1.56
C9orf40-201ENST00000376854 PHKG1Q16816 387 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 ARMC12Q5T9G4 340 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 RBFAQ8N0V3 343 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 LIX1Q8N485 282 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 CLDN19Q8N6F1 224 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 SLC47A1Q96FL8 570 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 MYO19Q96H55 970 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 CD244Q9BZW8 370 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 SMURF2Q9HAU4 748 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 LRFN2Q9ULH4 789 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 SLC28A1O00337 649 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 JUNBP17275 347 aaPredicted RBP24.81■■□□□ 1.56
C9orf40-201ENST00000376854 DGKAP23743 735 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 MAPK10P53779 464 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 SPANXN4Q5MJ08 99 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 DNAJC14Q6Y2X3 702 aaPredicted RBP24.81■■□□□ 1.56
C9orf40-201ENST00000376854 SLC22A17Q8WUG5 538 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 RDH12Q96NR8 316 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 ASB8Q9H765 288 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 HPS4Q9NQG7 708 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 TRPM5Q9NZQ8 1165 aa24.81■■□□□ 1.56
C9orf40-201ENST00000376854 TBKBP1A7MCY6 615 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 ARVCFO00192 962 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 GAPDHSO14556 408 aaPredicted RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 SCAMP3O14828 347 aaKnown RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 TBL1XO60907 577 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 ULK1O75385 1050 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 OR1D2P34982 312 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 SGO1Q5FBB7 561 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 RBM48Q5RL73 367 aaKnown RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 CACHD1Q5VU97 1274 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 TTC23Q5W5X9 447 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 GLB1L3Q8NCI6 653 aaPredicted RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 PIH1D2Q8WWB5 315 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 FAM162AQ96A26 154 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 TBCDQ9BTW9 1192 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 PAIP1Q9H074 479 aaKnown RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 FAM118AQ9NWS6 357 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 SLC25A37Q9NYZ2 338 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 ELOVL7A1L3X0 281 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 PGLSO95336 258 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 PGRP06401 933 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 HMGA1P17096 107 aaKnown RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 GNPDA1P46926 289 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 TMBIM6P55061 237 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 SMU1Q2TAY7 513 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 ZNF783Q6ZMS7 281 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 MSRB3Q8IXL7 192 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 KRTCAP2Q8N6L1 136 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 FEM1AQ9BSK4 669 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 ACTR8Q9H981 624 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 DNAAF2Q9NVR5 837 aaKnown RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 UTS2RQ9UKP6 389 aa24.8■■□□□ 1.56
C9orf40-201ENST00000376854 ZNF490Q9ULM2 529 aaPredicted RBP24.8■■□□□ 1.56
C9orf40-201ENST00000376854 C2orf78A6NCI8 922 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 GNGT2O14610 69 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 ABCB7O75027 752 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 SEC22BO75396 215 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 SEC14L2O76054 403 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 IL6P05231 212 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 CCNA2P20248 432 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms