RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GRM2Q14416 872 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 ZNF77Q15935 545 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 C6orf52Q5T4I8 152 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 LCN8Q6JVE9 175 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 SLC2A7Q6PXP3 512 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 AMIGO2Q86SJ2 522 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 KIAA2013Q8IYS2 634 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 AHI1Q8N157 1196 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 PIDD1Q9HB75 910 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 SLC24A3Q9HC58 644 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 ARMC1Q9NVT9 282 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 KLHL42Q9P2K6 505 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 ERVW-1Q9UQF0 538 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 RNF11Q9Y3C5 154 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 HCFC2Q9Y5Z7 792 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 WNT6Q9Y6F9 365 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 AK5Q9Y6K8 562 aa19.82■□□□□ 0.76
VSX1-202ENST00000376709 EBLN1P0CF75 366 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 PIM1P11309 404 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 ZNF26P17031 533 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 GSK3BP49841 420 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 LIPEQ05469 1076 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 BOP1Q14137 746 aaKnown RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 TBCELQ5QJ74 424 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 TMEM215Q68D42 235 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 UBE2R2Q712K3 238 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 CYB5D2Q8WUJ1 264 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 UHRF1Q96T88 793 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 NTMT1Q9BV86 223 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 COQ10BQ9H8M1 238 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 FARSBQ9NSD9 589 aaKnown RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 CCM2LQ9NUG4 571 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 INTS7Q9NVH2 962 aaKnown RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 CDH23Q9H251 3354 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 PABPN1LA6NDY0 278 aaKnown RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 LOC730098B7Z3J9 87 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 NPPAP01160 153 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 CYP2A6P11509 494 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 ATP1B2P14415 290 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 AOAHP28039 575 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 WEE1P30291 646 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 NNMTP40261 264 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 IMPG1Q17R60 797 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 SGO1Q5FBB7 561 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 IRAK1BP1Q5VVH5 260 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 NANOGP8Q6NSW7 305 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 ISLR2Q6UXK2 745 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 SORCS1Q8WY21 1168 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 ZSWIM3Q96MP5 696 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 TMEM74Q96NL1 305 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 TRAPPC9Q96Q05 1148 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 CIB1Q99828 191 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 HEPHQ9BQS7 1158 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 ACTL8Q9H568 366 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 NANOGQ9H9S0 305 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 TRPS1Q9UHF7 1281 aa19.81■□□□□ 0.76
VSX1-202ENST00000376709 ZNF490Q9ULM2 529 aaPredicted RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 EIF3LQ9Y262 564 aaKnown RBP19.81■□□□□ 0.76
VSX1-202ENST00000376709 WASH3PC4AMC7 463 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 EIF3FO00303 357 aaPredicted RBP19.8■□□□□ 0.76
VSX1-202ENST00000376709 SLC28A1O00337 649 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 LEFTY1O75610 366 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 ZNF30P17039 623 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 IL10P22301 178 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 CDKL1Q00532 357 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 GRASPQ7Z6J2 395 aaPredicted RBP19.8■□□□□ 0.76
VSX1-202ENST00000376709 PHOSPHO2Q8TCD6 241 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 ING5Q8WYH8 240 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 MUC13Q9H3R2 512 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 TMPRSS11EQ9UL52 423 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 PCDHGB4Q9UN71 923 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 PDE10AQ9Y233 779 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 CCL27Q9Y4X3 112 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 PCDHGB5Q9Y5G0 923 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 TTC34A8MYJ7 566 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 PER2O15055 1255 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 XYLBO75191 536 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 MTX2O75431 263 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 HIST1H2AGP0C0S8 130 aaPredicted RBP19.8■□□□□ 0.76
VSX1-202ENST00000376709 HIST1H2ADP20671 130 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 JAK1P23458 1154 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 SOX11P35716 441 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 HMGCS1Q01581 520 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 MAD2L1Q13257 205 aaPredicted RBP19.8■□□□□ 0.76
VSX1-202ENST00000376709 HMBOX1Q6NT76 420 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 SCAMP4Q969E2 229 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 HIST1H2AHQ96KK5 128 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 TSC22D3Q99576 134 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 HIST1H2AJQ99878 128 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 H2AFJQ9BTM1 129 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 ACTR8Q9H981 624 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 UBAP1Q9NZ09 502 aa19.8■□□□□ 0.76
VSX1-202ENST00000376709 MBD1Q9UIS9 605 aaPredicted RBP19.8■□□□□ 0.76
VSX1-202ENST00000376709 NOTCH4Q99466 2003 aa19.79■□□□□ 0.76
VSX1-202ENST00000376709 HNRNPRO43390 633 aaKnown RBP19.79■□□□□ 0.76
VSX1-202ENST00000376709 WDR47O94967 919 aa19.79■□□□□ 0.76
VSX1-202ENST00000376709 CLDN9O95484 217 aa19.79■□□□□ 0.76
VSX1-202ENST00000376709 C8GP07360 202 aa19.79■□□□□ 0.76
VSX1-202ENST00000376709 MTHFD1P11586 935 aaKnown RBP19.79■□□□□ 0.76
VSX1-202ENST00000376709 GRIA2P42262 883 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms