RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NECAB2Q7Z6G3 386 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 CADM3Q8N126 398 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 NDNFQ8TB73 568 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 LINGO1Q96FE5 620 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 SLC47A1Q96FL8 570 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 EXOC2Q96KP1 924 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 RPRD1AQ96P16 312 aaPredicted RBP13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 HERC2P3Q9BVR0 1158 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 DOCK4Q8N1I0 1966 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 LOC100130705A0A1B0GUX0 176 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 SLC1A7O00341 560 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 NDUFS2O75306 463 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 UGT2B11O75310 529 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 OR1E1P30953 314 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 HOXD12P35452 270 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PBX3P40426 434 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 RPS3AP61247 264 aaKnown RBP13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 TLE2Q04725 743 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 IL10RBQ08334 325 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 SERINC3Q13530 473 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PTGR1Q14914 329 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 AP5B1Q2VPB7 878 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PGS1Q32NB8 556 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 TRIM60Q495X7 471 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PSAPL1Q6NUJ1 521 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 FEM1AQ9BSK4 669 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 UGT2B28Q9BY64 529 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 ACTR8Q9H981 624 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 AKIP1Q9NQ31 210 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF232Q9UNY5 417 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 HTR3EA5X5Y0 456 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ANKRD28O15084 1053 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 KLK8O60259 260 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 HPRP00739 348 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 CYP11A1P05108 521 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 PFKLP17858 780 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 MAP2K4P45985 399 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 PIK3CGP48736 1102 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 EMX1Q04741 257 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 FPGSQ05932 587 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ABRAXAS2Q15018 415 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF598Q86UK7 904 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 CFAP52Q8N1V2 620 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 MDGA1Q8NFP4 955 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 RMDN1Q96DB5 314 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 C1QTNF3Q9BXJ4 246 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 DNMT3BQ9UBC3 853 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 GIT1Q9Y2X7 761 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 A0A0D9SEW6 157 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ARNTLO00327 626 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 GPR39O43194 453 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 AQP9O43315 295 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 MITFO75030 526 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 UGT2B4P06133 528 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF140P52738 457 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 LAPTM4AQ15012 233 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ADPRMQ3LIE5 342 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 TMEM236Q5W0B7 351 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 TXNDC11Q6PKC3 985 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 GALNT5Q7Z7M9 940 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ANKRD13BQ86YJ7 626 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 PJA1Q8NG27 643 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 FATE1Q969F0 183 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 BPIFA1Q9NP55 256 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 HMG20AQ9NP66 347 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 POLE4Q9NR33 117 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 HEBP1Q9NRV9 189 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ATAD3AQ9NVI7 634 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 NLE1Q9NVX2 485 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 FNIP2Q9P278 1114 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ERVK-18Q9QC07 812 aa13.87□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF99A8MXY4 864 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 E2F6O75461 281 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 SLC2A4P14672 509 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 RGRP47804 291 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 GATMP50440 423 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 VBP1P61758 197 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 GTDC1Q4AE62 458 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 DEFB128Q7Z7B8 93 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF280BQ86YH2 543 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 NKAPQ8N5F7 415 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF548Q8NEK5 533 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 OR4F6Q8NGB9 312 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 FAR1Q8WVX9 515 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 HPS1Q92902 700 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 FAM162AQ96A26 154 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 CRISPLD2Q9H0B8 497 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 GORASP2Q9H8Y8 452 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 GIN1Q9NXP7 522 aa13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 TRMT6Q9UJA5 497 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-202ENST00000375692 NADKO95544 446 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms