RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FBXL22Q6P050 247 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CYS1Q717R9 158 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 STON2Q8WXE9 905 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 C8orf48Q96LL4 319 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 C1QTNF7Q9BXJ2 289 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 FCF1Q9Y324 198 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PCDHGA11Q9Y5H2 935 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 UBE2QL1A1L167 161 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 STBD1O95210 358 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 T-ENOLP0DO92 83 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 SKP1P63208 163 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MADCAM1Q13477 382 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 SLC2A7Q6PXP3 512 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MARVELD2Q8N4S9 558 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 FBXL20Q96IG2 436 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CFAP97Q9P2B7 532 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 LRRC37A3O60309 1634 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 J3KR12 359 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CDC7O00311 574 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 BTN3A3O00478 584 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 SDHDO14521 159 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 OR6A2O95222 327 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 ACADMP11310 421 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PTX3P26022 381 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 GTF2E2P29084 291 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 UFM1P61960 85 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 RPS24P62847 133 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CYP4F8P98187 520 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CEACAM7Q14002 265 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CCNIQ14094 377 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 ZBTB6Q15916 424 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PLEKHG6Q3KR16 790 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MPPE1Q53F39 396 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MTERF1Q99551 399 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 TNKS2Q9H2K2 1166 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 VRTNQ9H8Y1 702 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 GIMAP2Q9UG22 337 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 A0A0G2JLL6 359 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 SYN3O14994 580 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 DUSP11O75319 330 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 RNASEH2AO75792 299 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 FAM163BP0C2L3 166 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 ANXA8P13928 327 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 RPL4P36578 427 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 IL18Q14116 193 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 TLR1Q15399 786 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MED27Q6P2C8 311 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PRRT2Q7Z6L0 340 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 BIRC7Q96CA5 298 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CITED4Q96RK1 184 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 AIF1LQ9BQI0 150 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 STRA6Q9BX79 667 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 CYTH4Q9UIA0 394 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MYOCOSA0A1B0GUC4 107 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C1QTNF3-AMACRE9PGA6 284 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C9P02748 559 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 SDC2P34741 201 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 MAPK9P45984 424 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ADAM17P78536 824 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 SULT2A1Q06520 285 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 HKDC1Q2TB90 917 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 CILP2Q8IUL8 1156 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 TMCO6Q96DC7 493 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C11orf24Q96F05 449 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 SYT11Q9BT88 431 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 SP140LQ9H930 580 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C3orf14Q9HBI5 128 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PCDHGB3Q9Y5G1 929 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 A0A1W2PQ67 120 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 CARNS1A5YM72 827 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 CCNB2O95067 398 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ACADVLP49748 655 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ALDH3A2P51648 485 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ZNHIT3Q15649 155 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 MOGQ16653 247 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 FUT10Q6P4F1 479 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PRR23BQ6ZRT6 265 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 OSTM1Q86WC4 334 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PIK3R3Q92569 461 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ZUFSPQ96AP4 578 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 DUSP26Q9BV47 211 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM138Q9NPI0 162 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF510Q9Y2H8 683 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ISM1B1AKI9 464 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PER2O15055 1255 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 GADD45GO95257 159 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PRKCGP05129 697 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C8GP07360 202 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 FLT3LGP49771 235 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms