RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DNAJB8Q8NHS0 232 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 BPIFB1Q8TDL5 484 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 BIRC7Q96CA5 298 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CCDC115Q96NT0 180 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 SMIM14Q96QK8 99 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CGREF1Q99674 301 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 RDH14Q9HBH5 336 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 TRPS1Q9UHF7 1281 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 MAFFQ9ULX9 164 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CXorf51AA0A1B0GTR3 108 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 GFRA2O00451 464 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 PLOD2O00469 737 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 TPST1O60507 370 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 DEAF1O75398 565 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 KCNH1O95259 989 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 PRAMEF1O95521 474 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 ANXA6P08133 673 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 CBSLP0DN79 551 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 HRH2P25021 359 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 CBSP35520 551 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 CSKP41240 450 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 BCL2L1Q07817 233 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 AP5B1Q2VPB7 878 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 FAM98BQ52LJ0 330 aaKnown RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 GLYATQ6IB77 296 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 GRAMD4Q6IC98 578 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 SLC2A7Q6PXP3 512 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 LPCAT2Q7L5N7 544 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 PATL1Q86TB9 770 aaKnown RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 FAM217AQ8IXS0 508 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 ZNF786Q8N393 782 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 ZBTB2Q8N680 514 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 SH3GL1Q99961 368 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 RNF38Q9H0F5 515 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 IPPKQ9H8X2 491 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 ZFYVE1Q9HBF4 777 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 INTS7Q9NVH2 962 aaKnown RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 ETAA1Q9NY74 926 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 WWOXQ9NZC7 414 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 FCF1Q9Y324 198 aaKnown RBP13.69□□□□□ -0.22
HMGCL-203ENST00000374490 ASB1Q9Y576 335 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 FADS3Q9Y5Q0 445 aa13.69□□□□□ -0.22
HMGCL-203ENST00000374490 FAM149AA5PLN7 773 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ANKRD33BA6NCL7 494 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 H3BSA7 217 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 EIF3FO00303 357 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 EI24O14681 340 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 EBLN1P0CF75 366 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 G6PDP11413 515 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ACRV1P26436 265 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 AKT1P31749 480 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CA8P35219 290 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 HTR6P50406 440 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 NFATC2Q13469 925 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ZBED5Q49AG3 693 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CACHD1Q5VU97 1274 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 FAM151BQ6UXP7 276 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 RIMKLAQ8IXN7 391 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 FAM9CQ8IZT9 166 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ACDQ96AP0 544 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ESAMQ96AP7 390 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ALG14Q96F25 216 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 RDH12Q96NR8 316 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CHID1Q9BWS9 393 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 UGT2B28Q9BY64 529 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CIPCQ9C0C6 399 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ASB8Q9H765 288 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 RPF2Q9H7B2 306 aaKnown RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 LATS2Q9NRM7 1088 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 PKD2L2Q9NZM6 624 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CRLS1Q9UJA2 301 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 LSM7Q9UK45 103 aaKnown RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ZNF510Q9Y2H8 683 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 POLR3HQ9Y535 204 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 C2orf78A6NCI8 922 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 EPOPA6NHQ4 379 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 IQCF5A8MTL0 148 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 PRRG1O14668 218 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 IGSF6O95976 241 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 HPRP00739 348 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 TRBC1P01850 177 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 RAP2AP10114 183 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 NCK1P16333 377 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CTPS1P17812 591 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 UGT1A6P19224 532 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 GGT1P19440 569 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 SLC5A2P31639 672 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 SPAM1P38567 509 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms