RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ALDH16A1Q8IZ83 802 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 NATD1Q8N6N6 113 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FNDC5Q8NAU1 212 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 PAPD5Q8NDF8 572 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 GPR26Q8NDV2 337 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 BHLHE22Q8NFJ8 381 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FRS2Q8WU20 508 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 BTN2A2Q8WVV5 523 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FBXL8Q96CD0 374 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CCDC124Q96CT7 223 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 EID2BQ96D98 161 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 LINC00615Q96LM1 132 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CCDC115Q96NT0 180 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 SPATA9Q9BWV2 254 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 OSBPL11Q9BXB4 747 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 EPB41L1Q9H4G0 881 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 NOL11Q9H8H0 719 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 SFXN1Q9H9B4 322 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FBRSQ9HAH7 460 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 BPIFA1Q9NP55 256 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CD320Q9NPF0 282 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 ADGRE2Q9UHX3 823 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 MRPS23Q9Y3D9 190 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TSC22D4Q9Y3Q8 395 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 NPIPB15A6NHN6 443 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ZNF839A8K0R7 811 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 E7ENX8 843 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 K7ERQ8 282 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 LSM1O15116 133 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 CCL16O15467 120 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ATG13O75143 517 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 MOSPD3O75425 235 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PDE5AO76074 875 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 TNFAIP8O95379 198 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 CAPN1P07384 714 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ALDOCP09972 364 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 LINC00032P0C843 101 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ADH5P11766 374 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PPIBP23284 216 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SLC6A2P23975 617 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ITGB7P26010 798 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SERPINB1P30740 379 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 GMPRP36959 345 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 CCR10P46092 362 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 GSTM5P46439 218 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 HK3P52790 923 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PRSS12P56730 875 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ERVFC1P60507 584 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ERVPABLB-1P60509 514 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SFSWAPQ12872 951 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 TRAF3Q13114 568 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 RPA4Q13156 261 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 LAPTM5Q13571 262 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PWP1Q13610 501 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 E2F2Q14209 437 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 GRM2Q14416 872 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ELAVL3Q14576 367 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 TEAD2Q15562 447 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 IMPG1Q17R60 797 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 AP5B1Q2VPB7 878 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 BCL7AQ4VC05 210 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 LY6G5CQ5SRR4 150 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 HENMT1Q5T8I9 393 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ANO7Q6IWH7 933 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PAOXQ6QHF9 649 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 IL27RAQ6UWB1 636 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 GK5Q6ZS86 529 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 Q6ZSR9 355 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SPATA24Q86W54 205 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 TICAM1Q8IUC6 712 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ANKFN1Q8N957 763 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 OR4F6Q8NGB9 312 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 NRG4Q8WWG1 115 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 AUTS2Q8WXX7 1259 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 OR8D1Q8WZ84 308 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 EXT2Q93063 718 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 UBE2E3Q969T4 207 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 TESCQ96BS2 214 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 CXorf40BQ96DE9 158 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 CMTM7Q96FZ5 175 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 C3orf30Q96M34 536 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 RDH12Q96NR8 316 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 NPAS2Q99743 824 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 C9orf16Q9BUW7 83 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 UGT2B28Q9BY64 529 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 YTHDF1Q9BYJ9 559 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SHCBP1LQ9BZQ2 653 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 PITHD1Q9GZP4 211 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 DPEP2Q9H4A9 486 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 TUBB1Q9H4B7 451 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 EHD1Q9H4M9 534 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 ZDHHC6Q9H6R6 413 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 GORASP2Q9H8Y8 452 aa8.54□□□□□ -1.04
SNRNP40-202ENST00000373720 SARS2Q9NP81 518 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms