RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 HGH1Q9BTY7 390 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 MVB12BQ9H7P6 319 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 INTS10Q9NVR2 710 aaKnown RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 IL1RAPL1Q9NZN1 696 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 CDC23Q9UJX2 597 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 PCDHGA7Q9Y5G6 932 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 FREM2Q5SZK8 3169 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 OR5K3A6NET4 321 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 TOX3O15405 576 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-201ENST00000373554 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.53
HDAC8-201ENST00000373554 RAD51CO43502 376 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 TLX3O43711 291 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-201ENST00000373554 KDM1AO60341 852 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 BANF1O75531 89 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 C9P02748 559 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 TUBB4AP04350 444 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 ANKRD34CP0C6C1 535 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 RPL21P46778 160 aaKnown RBP11.71□□□□□ -0.53
HDAC8-201ENST00000373554 MAPK10P53779 464 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 ADARP55265 1226 aaKnown RBP11.71□□□□□ -0.53
HDAC8-201ENST00000373554 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 SPANXN3Q5MJ09 141 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 LRRC69Q6ZNQ3 347 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 OTOAQ7RTW8 1153 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 CLEC14AQ86T13 490 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 KCNMB4Q86W47 210 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 SLC22A15Q8IZD6 547 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 KRT222Q8N1A0 295 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF248Q8NDW4 579 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 LKAAEAR1Q8TD35 194 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 LCN9Q8WX39 176 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 C9orf72Q96LT7 481 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 ERP44Q9BS26 406 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 RAB33BQ9H082 229 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 CCDC68Q9H2F9 335 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 TRIT1Q9H3H1 467 aaKnown RBP11.71□□□□□ -0.53
HDAC8-201ENST00000373554 EPHA6Q9UF33 1036 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 ASF1AQ9Y294 204 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 CRYL1Q9Y2S2 319 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 SNX24Q9Y343 169 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 FAM169AQ9Y6X4 670 aa11.71□□□□□ -0.53
HDAC8-201ENST00000373554 APC2O95996 2303 aa11.71□□□□□ -0.54
HDAC8-201ENST00000373554 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 E5RI56 91 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 MATN2O00339 956 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 GPC4O75487 556 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 RPN2P04844 631 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 CCL4P13236 92 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 AOAHP28039 575 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 ACADLP28330 430 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 FMO4P31512 558 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 SLC5A2P31639 672 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 EIF2S3P41091 472 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 SLC1A2P43004 574 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 LEPRP48357 1165 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 RAB15P59190 212 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 PRKAA1Q13131 559 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 CTBP1Q13363 440 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 WHAMMP3Q1A5X7 153 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 CTSL3PQ5NE16 218 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 FAM92BQ6ZTR7 304 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 CENPUQ71F23 418 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 ZNF572Q7Z3I7 529 aaPredicted RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 PRSS42Q7Z5A4 293 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 ARHGAP22Q7Z5H3 698 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 PHC3Q8NDX5 983 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 OR52E1Q8NGJ3 308 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 ART4Q93070 314 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 BIRC8Q96P09 236 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 CD180Q99467 661 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 RAB17Q9H0T7 212 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 SRMSQ9H3Y6 488 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 HRASLS2Q9NWW9 162 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 POLG2Q9UHN1 485 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 CHMP2BQ9UQN3 213 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 UTP11Q9Y3A2 253 aaKnown RBP11.7□□□□□ -0.54
HDAC8-201ENST00000373554 PIKFYVEQ9Y2I7 2098 aa11.7□□□□□ -0.54
HDAC8-201ENST00000373554 ACACAQ13085 2346 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 WDFY3Q8IZQ1 3526 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 A0A087WV48 116 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 OR6C74A6NCV1 312 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 TLCD2A6NGC4 264 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 EFCAB7A8K855 629 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 B4E171 279 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 NVLO15381 856 aaKnown RBP11.69□□□□□ -0.54
HDAC8-201ENST00000373554 PRAMEF10O60809 474 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 NIPSNAP2O75323 286 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 S1PR4O95977 384 aa11.69□□□□□ -0.54
HDAC8-201ENST00000373554 FGF3P11487 239 aaPredicted RBP11.69□□□□□ -0.54
HDAC8-201ENST00000373554 PKMP14618 531 aaKnown RBP11.69□□□□□ -0.54
HDAC8-201ENST00000373554 CHRM3P20309 590 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms