RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 OR52E6Q96RD3 313 aa9.61□□□□□ -0.87
CSMD2-203ENST00000373377 RBM4BQ9BQ04 359 aaKnown RBP9.61□□□□□ -0.87
CSMD2-203ENST00000373377 RBM4Q9BWF3 364 aaKnown RBP9.61□□□□□ -0.87
CSMD2-203ENST00000373377 MROQ9BYG7 248 aa9.61□□□□□ -0.87
CSMD2-203ENST00000373377 YTHDF1Q9BYJ9 559 aaKnown RBP9.61□□□□□ -0.87
CSMD2-203ENST00000373377 DPY30Q9C005 99 aa9.61□□□□□ -0.87
CSMD2-203ENST00000373377 POLR1EQ9GZS1 481 aaKnown RBP9.61□□□□□ -0.87
CSMD2-203ENST00000373377 NSUN3Q9H649 340 aaKnown RBP9.61□□□□□ -0.87
CSMD2-203ENST00000373377 PRG3Q9Y2Y8 225 aaPredicted RBP9.61□□□□□ -0.87
CSMD2-203ENST00000373377 SMIM35A0A1B0GVV1 85 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SLC12A8A0AV02 714 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ELOVL7A1L3X0 281 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PDHXO00330 501 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PRSS23O95084 383 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PAPSS2O95340 614 aaPredicted RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PEX11BO96011 259 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SERPINF2P08697 491 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 C7P10643 843 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 GGT1P19440 569 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 AKT1P31749 480 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ADAM17P78536 824 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TWF1Q12792 350 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TUBA3CQ13748 450 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SOWAHCQ53LP3 525 aaPredicted RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 BRMS1LQ5PSV4 323 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TMEM86AQ8N2M4 240 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ATG16L2Q8NAA4 619 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ARRDC2Q8TBH0 407 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NETO1Q8TDF5 533 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SLC13A3Q8WWT9 602 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MYEOVQ96EZ4 313 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TSSK3Q96PN8 268 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TINF2Q9BSI4 451 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 OSBPL10Q9BXB5 764 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 IPPKQ9H8X2 491 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ZBTB20Q9HC78 741 aaPredicted RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 GMPPBQ9Y5P6 360 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TYW5A2RUC4 315 aaKnown RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 UNCXA6NJT0 531 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 A8MV72 311 aaPredicted RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 H0Y626 953 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SNPHO15079 494 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TULP3O75386 442 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TRIM16O95361 564 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CHRNA1P02708 482 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ZNF24P17028 368 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 AQP1P29972 269 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MC4RP32245 332 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 DCTP40126 519 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NEK2P51955 445 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CASP9P55211 416 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NFKB2Q00653 900 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SEMG2Q02383 582 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CDK5R2Q13319 367 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SLC14A2Q15849 920 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MS4A13Q5J8X5 152 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CES5AQ6NT32 575 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 C10orf111Q8N326 155 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 LIX1Q8N485 282 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TTC9BQ8N6N2 239 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SCAIQ8N9R8 606 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 FAR1Q8WVX9 515 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MUL1Q969V5 352 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MAGEE1Q9HCI5 957 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PALMDQ9NP74 551 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SLC6A13Q9NSD5 602 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 DDX28Q9NUL7 540 aaKnown RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 FAM8A1Q9UBU6 413 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ZNF451Q9Y4E5 1061 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 FAM92AA1XBS5 289 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NBNO60934 754 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MLYCDO95822 493 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 C1QCP02747 245 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CD36P16671 472 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PSEN2P49810 448 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ST13P50502 369 aaKnown RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ISL1P61371 349 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CPSF6Q16630 551 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 LAIR2Q6ISS4 152 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 MSANTD2Q6P1R3 559 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 Q6ZPB1 254 aaPredicted RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PLEKHG7Q6ZR37 379 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SPATC1Q76KD6 591 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NECAB2Q7Z6G3 386 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ADHFE1Q8IWW8 467 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NPLOC4Q8TAT6 608 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 STARD8Q92502 1023 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 ULK4Q96C45 1275 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
CSMD2-203ENST00000373377 TPD52L3Q96J77 140 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 NACA2Q9H009 215 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SMPD4Q9NXE4 827 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SCN3BQ9NY72 215 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 PCDHB14Q9Y5E9 798 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 SNX8Q9Y5X2 465 aa9.6□□□□□ -0.87
CSMD2-203ENST00000373377 CBX4O00257 560 aa9.59□□□□□ -0.87
CSMD2-203ENST00000373377 PFDN6O15212 129 aa9.59□□□□□ -0.87
CSMD2-203ENST00000373377 NDUFB5O43674 189 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms