RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 ATG2AQ2TAZ0 1938 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 GFYI3L273 518 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 KPNA3O00505 521 aaPredicted RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 LSM1O15116 133 aaKnown RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 PEX1O43933 1283 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 STAMBPO95630 424 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 MSX2P35548 267 aaPredicted RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 GDF5P43026 501 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 SLC7A2P52569 658 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 AP1S2P56377 157 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 MRPS22P82650 360 aaKnown RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 MAD2L1Q13257 205 aaPredicted RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 BOP1Q14137 746 aaKnown RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 C9orf50Q5SZB4 431 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 ASZ1Q8WWH4 475 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 ELMO1Q92556 727 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 N4BP2L2Q92802 583 aaPredicted RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 FGF13Q92913 245 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 NXPE3Q969Y0 559 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 KLHL4Q9C0H6 718 aa23.24■■□□□ 1.31
SNX21-204ENST00000372542 LEF1Q9UJU2 399 aaPredicted RBP23.24■■□□□ 1.31
SNX21-204ENST00000372542 PRORSD1PA6NEY8 169 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 GRXCR2A6NFK2 248 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 HEPACAM2A8MVW5 462 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 FADS2P1A8MWK0 482 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 PRRT4C9JH25 899 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 EEDO75530 441 aaKnown RBP23.23■■□□□ 1.31
SNX21-204ENST00000372542 TCN1P20061 433 aaPredicted RBP23.23■■□□□ 1.31
SNX21-204ENST00000372542 ITGB7P26010 798 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 POLR2JP52435 117 aaKnown RBP23.23■■□□□ 1.31
SNX21-204ENST00000372542 ABRAXAS2Q15018 415 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 ACOX1Q15067 660 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 GAB4Q2WGN9 574 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 HNRNPA1L2Q32P51 320 aaKnown RBP23.23■■□□□ 1.31
SNX21-204ENST00000372542 ZNF366Q8N895 744 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 SKA2Q8WVK7 121 aaPredicted RBP23.23■■□□□ 1.31
SNX21-204ENST00000372542 GLYATL1Q969I3 302 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 CDCA3Q99618 268 aaPredicted RBP23.23■■□□□ 1.31
SNX21-204ENST00000372542 C1orf50Q9BV19 199 aa23.23■■□□□ 1.31
SNX21-204ENST00000372542 IFRD1O00458 451 aaPredicted RBP23.22■■□□□ 1.31
SNX21-204ENST00000372542 WNT9AO14904 365 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 SGTAO43765 313 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 C8BP07358 591 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 SLC6A11P48066 632 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 UFM1P61960 85 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 ELP6Q0PNE2 266 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 KCNC3Q14003 757 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 CYP2U1Q7Z449 544 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 SPATA24Q86W54 205 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 MCOLN3Q8TDD5 553 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 AP2M1Q96CW1 435 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 LRRC58Q96CX6 371 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 MBD1Q9UIS9 605 aaPredicted RBP23.22■■□□□ 1.31
SNX21-204ENST00000372542 PRRC2BQ5JSZ5 2229 aaKnown RBP23.22■■□□□ 1.31
SNX21-204ENST00000372542 CCDC154A6NI56 674 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 LIN7AO14910 233 aaPredicted RBP23.22■■□□□ 1.31
SNX21-204ENST00000372542 MTX2O75431 263 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 NPPAP01160 153 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 ZFP36L2P47974 494 aaKnown RBP23.22■■□□□ 1.31
SNX21-204ENST00000372542 CLNS1AP54105 237 aaKnown RBP23.22■■□□□ 1.31
SNX21-204ENST00000372542 PRKG2Q13237 762 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 TRIP10Q15642 601 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 AP5B1Q2VPB7 878 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 IRGCQ6NXR0 463 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 SERPINA13PQ6UXR4 307 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 MBOAT1Q6ZNC8 495 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 TRIM46Q7Z4K8 759 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 GALNT13Q8IUC8 556 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 FAM156AQ8NDB6 213 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 ZFYVE19Q96K21 471 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 CCL27Q9Y4X3 112 aa23.22■■□□□ 1.31
SNX21-204ENST00000372542 MUC22E2RYF6 1773 aaPredicted RBP23.21■■□□□ 1.31
SNX21-204ENST00000372542 LOC730098B7Z3J9 87 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 FXYD1O00168 92 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 ULK1O75385 1050 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 SLCO2B1O94956 709 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 CLDN9O95484 217 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 POM121L1PQ3SYA9 428 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 GGTA1PQ4G0N0 100 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 C9orf64Q5T6V5 341 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 ZFAND4Q86XD8 727 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 RASGRP3Q8IV61 690 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 VRK3Q8IV63 474 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 PLCD3Q8N3E9 789 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 PPP1R16AQ96I34 528 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 MAGEB10Q96LZ2 347 aaPredicted RBP23.21■■□□□ 1.31
SNX21-204ENST00000372542 COQ10AQ96MF6 247 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 KLQ9UEF7 1012 aa23.21■■□□□ 1.31
SNX21-204ENST00000372542 YBX2Q9Y2T7 364 aaKnown RBP23.21■■□□□ 1.31
SNX21-204ENST00000372542 KIF26AQ9ULI4 1882 aaPredicted RBP23.2■■□□□ 1.3
SNX21-204ENST00000372542 PRSS51A0A1B0GVH4 220 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 MANBAO00462 879 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 KRT6AP02538 564 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 KRT6BP04259 564 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 HSD17B1P14061 328 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 MAPK9P45984 424 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 SLC6A12P48065 614 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 KRT6CP48668 564 aa23.2■■□□□ 1.3
SNX21-204ENST00000372542 ELAVL3Q14576 367 aaKnown RBP23.2■■□□□ 1.3
SNX21-204ENST00000372542 OGFRL1Q5TC84 451 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms