RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 MIER2Q8N344 545 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 PDPRQ8NCN5 879 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 CATSPER1Q8NEC5 780 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 TSTD1Q8NFU3 115 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 EEF1AKMT1Q8WVE0 214 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 PYDC1Q8WXC3 89 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 FAM136AQ96C01 138 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 EID2BQ96D98 161 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 ASB9Q96DX5 294 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 ZNF641Q96N77 438 aaPredicted RBP13.83□□□□□ -0.19
LDB3-204ENST00000372066 SLC30A3Q99726 388 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 NPAS2Q99743 824 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 ECSITQ9BQ95 431 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 ASB8Q9H765 288 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 SPAG4Q9NPE6 437 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 LATS2Q9NRM7 1088 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 CD274Q9NZQ7 290 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 TBC1D14Q9P2M4 693 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 IKZF3Q9UKT9 509 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 NUP210Q8TEM1 1887 aaPredicted RBP13.83□□□□□ -0.19
LDB3-204ENST00000372066 PIKFYVEQ9Y2I7 2098 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 AGAP14A8MT82 685 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 SCAMP3O14828 347 aaKnown RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 TSPAN8P19075 237 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 HNF1BP35680 557 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 SEC13P55735 322 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 FOXM1Q08050 763 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 CEACAM7Q14002 265 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 TGFBIQ15582 683 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 KIF19Q2TAC6 998 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 MYLK3Q32MK0 819 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 USP39Q53GS9 565 aaKnown RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 SAMD4BQ5PRF9 694 aaKnown RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 TCEAL6Q6IPX3 200 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 C8orf82Q6P1X6 216 aaPredicted RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 FAM151BQ6UXP7 276 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 GPRIN3Q6ZVF9 776 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 TCEAL3Q969E4 200 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 ULK4Q96C45 1275 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 TUBGCP3Q96CW5 907 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 OTUB2Q96DC9 234 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 C3orf30Q96M34 536 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 NSUN5Q96P11 429 aaKnown RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 MCCC1Q96RQ3 725 aaPredicted RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 HGH1Q9BTY7 390 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 KLHL4Q9C0H6 718 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 SDR39U1Q9NRG7 319 aaPredicted RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 CCDC167Q9P0B6 97 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 POLG2Q9UHN1 485 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 CROTQ9UKG9 612 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 INTS6Q9UL03 887 aaKnown RBP13.83□□□□□ -0.2
LDB3-204ENST00000372066 PCDHGA7Q9Y5G6 932 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 BPTFQ12830 3046 aa13.83□□□□□ -0.2
LDB3-204ENST00000372066 LRRC14BA6NHZ5 514 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 FBP2O00757 339 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 CFLARO15519 480 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 POP4O95707 220 aaKnown RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 ALDOCP09972 364 aaKnown RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 CBSLP0DN79 551 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 NFKBIAP25963 317 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 CBSP35520 551 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 RBBP7Q16576 425 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 CDKL4Q5MAI5 379 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 IRAK1BP1Q5VVH5 260 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 TTC23LQ6PF05 361 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 IZUMO2Q6UXV1 221 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 RNF165Q6ZSG1 346 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 NXPE1Q8N323 547 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 BHMTQ93088 406 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 SCRN2Q96FV2 425 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 PLEKHG4BQ96PX9 1271 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 HOPXQ9BPY8 73 aaPredicted RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 SUV39H2Q9H5I1 410 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 IL26Q9NPH9 171 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 SEMA4BQ9NPR2 832 aaPredicted RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 GALPQ9UBC7 116 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 FNDC3AQ9Y2H6 1198 aaKnown RBP13.82□□□□□ -0.2
LDB3-204ENST00000372066 OARD1Q9Y530 152 aa13.82□□□□□ -0.2
LDB3-204ENST00000372066 ANKRD12Q6UB98 2062 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 H3BNX3 289 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 K7EQS6 105 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 E2F3O00716 465 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 TRIM24O15164 1050 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 KCNK5O95279 499 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 CLDN7O95471 211 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 STAMBPO95630 424 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 PABPC1P11940 636 aaKnown RBP13.81□□□□□ -0.2
LDB3-204ENST00000372066 BPIP17213 487 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 OPRD1P41143 372 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 DPP6P42658 865 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 HK3P52790 923 aa13.81□□□□□ -0.2
LDB3-204ENST00000372066 TRIM25Q14258 630 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms