RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IGSF8Q969P0 613 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 TMEM125Q96AQ2 219 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 CHFRQ96EP1 664 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 CCDC138Q96M89 665 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF641Q96N77 438 aaPredicted RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 PSD2Q9BQI7 771 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 MROQ9BYG7 248 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 MUC3BQ9H195 1237 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 AKTIPQ9H8T0 292 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 POPDC3Q9HBV1 291 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC52A3Q9NQ40 469 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 SCHIP1Q9P0W5 487 aaPredicted RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 CLEC4EQ9ULY5 219 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 A0A0C4DFX4 3053 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 DENND4CQ5VZ89 1909 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 A0A1W2PP18 115 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 TMEM247A6NEH6 219 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 E9PAM4 449 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 NR5A2O00482 541 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 MATN3O15232 486 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 SLC7A4O43246 635 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 KATNA1O75449 491 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 PRSS23O95084 383 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 CTHP32929 405 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 TRAF2Q12933 501 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 BNIP3Q12983 259 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 OXA1LQ15070 435 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 CYP51A1Q16850 503 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 GAB4Q2WGN9 574 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 UNC50Q53HI1 259 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 HECTD2Q5U5R9 776 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 GTF2IRD2BQ6EKJ0 949 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 XKR5Q6UX68 686 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 GTF2IRD2Q86UP8 949 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 AADATQ8N5Z0 425 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 OR9I1Q8NGQ6 314 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 FAM3CQ92520 227 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 EDAQ92838 391 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 FATE1Q969F0 183 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 POP5Q969H6 163 aaKnown RBP11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 AURKBQ96GD4 344 aaPredicted RBP11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 FBXL20Q96IG2 436 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 C1orf74Q96LT6 269 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 FICDQ9BVA6 458 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 RAD21L1Q9H4I0 556 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 C8orf33Q9H7E9 229 aaPredicted RBP11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 NANOGQ9H9S0 305 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 FBRSL1Q9HCM7 1045 aaKnown RBP11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 TNFRSF12AQ9NP84 129 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 FIS1Q9Y3D6 152 aa11.27□□□□□ -0.61
TSPAN1-201ENST00000372003 NUP210Q8TEM1 1887 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 MYLKQ15746 1914 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CLDN25C9JDP6 229 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 H0Y626 953 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 GFRA2O00451 464 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 UBFD1O14562 309 aaKnown RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 AZIN1O14977 448 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 FGF10O15520 208 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 HOXC11O43248 304 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CNOT3O75175 753 aaKnown RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 EEDO75530 441 aaKnown RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CNTN5O94779 1100 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 SEC24DO94855 1032 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 SUPT7LO94864 414 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 LRIG2O94898 1065 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 UGT2B4P06133 528 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 HOXB6P17509 224 aaKnown RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CAPN3P20807 821 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CD247P20963 164 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 JAK1P23458 1154 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 HOXD9P28356 352 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 HOXC13P31276 330 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 OPRD1P41143 372 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 GSK3BP49841 420 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 ALDH3A2P51648 485 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CCR3P51677 355 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 OCA2Q04671 838 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 SEPT6Q14141 434 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 POU6F1Q14863 301 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 PON2Q15165 354 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 TTC23Q5W5X9 447 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 EGFLAMQ63HQ2 1017 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 RALGPS2Q86X27 583 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 SLC15A4Q8N697 577 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 HJURPQ8NCD3 748 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 RHEBL1Q8TAI7 183 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 VMP1Q96GC9 406 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 KCTD14Q9BQ13 255 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 NUSAP1Q9BXS6 441 aaKnown RBP11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 ALG2Q9H553 416 aa11.26□□□□□ -0.61
TSPAN1-201ENST00000372003 CYP4F12Q9HCS2 524 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms