RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SCIMPQ6UWF3 145 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 C6orf89Q6UWU4 347 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 UNC5DQ6UXZ4 953 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 TAOK1Q7L7X3 1001 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 TBC1D1Q86TI0 1168 aaPredicted RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 CPNE9Q8IYJ1 553 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 FBF1Q8TES7 1133 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ZDHHC1Q8WTX9 485 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 PTCD2Q8WV60 388 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 TTC17Q96AE7 1141 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 HIC2Q96JB3 615 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 VAT1Q99536 393 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 FAM167BQ9BTA0 163 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 SRMSQ9H3Y6 488 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 IL26Q9NPH9 171 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ARL15Q9NXU5 204 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ZFR2Q9UPR6 939 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 ARNTLO00327 626 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 YY2O15391 372 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 CDC123O75794 336 aaPredicted RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 LATS1O95835 1130 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 ITIH1P19827 911 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 SPINT3P49223 89 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 SRSF11Q05519 484 aaKnown RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 SCAPQ12770 1279 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 ITGA9Q13797 1035 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PTK2BQ14289 1009 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 GAB4Q2WGN9 574 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 LACTB2Q53H82 288 aaPredicted RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 NDUFAF5Q5TEU4 345 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PPP4R4Q6NUP7 873 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 DBX2Q6ZNG2 339 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PIANPQ8IYJ0 282 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 SIDT2Q8NBJ9 832 aaKnown RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 MDM1Q8TC05 714 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 GLMNQ92990 594 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PPM1MQ96MI6 270 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 SERPINB12Q96P63 405 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 OR2M4Q96R27 311 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 GPR21Q99679 349 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 SH3GL2Q99962 352 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 ERP44Q9BS26 406 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 TRIM54Q9BYV2 358 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 VPS45Q9NRW7 570 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 NDUFA13Q9P0J0 144 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 MARK1Q9P0L2 795 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 LUZP4Q9P127 313 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 FBXO5Q9UKT4 447 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PADI4Q9UM07 663 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 RNF215Q9Y6U7 377 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 ABCA4P78363 2273 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 CCNT2O60583 730 aaKnown RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 VPS26AO75436 327 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PAHP00439 452 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 F10P00742 488 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 RETP07949 1114 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 TCEA1P23193 301 aaKnown RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 PDHA2P29803 388 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PHBP35232 272 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 SOX11P35716 441 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 IGFALSP35858 605 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 HK3P52790 923 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 GRM3Q14832 879 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 EFTUD2Q15029 972 aaKnown RBP eCLIP6.9□□□□□ -1.34e-6■■■■□ 20.7
USP1-202ENST00000371146 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 TPRG1LQ5T0D9 272 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 PIP5KL1Q5T9C9 394 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 GUSBP11Q6P575 273 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 LRRTM4Q86VH4 590 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 CREG2Q8IUH2 290 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 NIPA2Q8N8Q9 360 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 TFGQ92734 400 aaPredicted RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 GLYATL1Q969I3 302 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 ZNF641Q96N77 438 aaPredicted RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 WWP1Q9H0M0 922 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 WWOXQ9NZC7 414 aa6.9□□□□□ -1.3
USP1-202ENST00000371146 MARCH4Q9P2E8 410 aaPredicted RBP6.9□□□□□ -1.3
USP1-202ENST00000371146 ARPC4-TTLL3A0A0A6YYG9 625 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 TCRBV5S1A1TA0A578 114 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 BCLAF3A2AJT9 711 aaKnown RBP6.9□□□□□ -1.31
USP1-202ENST00000371146 OR6C74A6NCV1 312 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 ZNF860A6NHJ4 632 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 HACD1B0YJ81 288 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 CCDC188H7C350 402 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 K7ESF4 209 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 GFRA2O00451 464 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 HAT1O14929 419 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 PRAMEF10O60809 474 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 GCATO75600 419 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 HAUS5O94927 633 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 MT-ND3P03897 115 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 RPLP0P05388 317 aaKnown RBP6.9□□□□□ -1.31
USP1-202ENST00000371146 DGKAP23743 735 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 PTPN7P35236 360 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 SKOR1P84550 965 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 CDK3Q00526 305 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 SEMA5AQ13591 1074 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 PDCD4Q53EL6 469 aaKnown RBP6.9□□□□□ -1.31
USP1-202ENST00000371146 PRAMEF17Q5VTA0 474 aa6.9□□□□□ -1.31
USP1-202ENST00000371146 PMS2CLQ68D20 193 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms