RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 NADK2Q4G0N4 442 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 ARMC6Q6NXE6 501 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 SERPINA9Q86WD7 417 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 FAM71DQ8N9W8 422 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 TEX19Q8NA77 164 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 ACVR1CQ8NER5 493 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 OR52E1Q8NGJ3 308 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 LCN9Q8WX39 176 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 DCUN1D1Q96GG9 259 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 COPS8Q99627 209 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 GPR87Q9BY21 358 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 SOHLH2Q9NX45 425 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 ZDHHC3Q9NYG2 299 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 MAST4O15021 2626 aa12.78□□□□□ -0.36
RPF1-201ENST00000370654 GSAPA4D1B5 854 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 TMEM150CB9EJG8 249 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 MEN1O00255 615 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ITGALP20701 1170 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ACRV1P26436 265 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 CD97P48960 835 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 CCL11P51671 97 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ZNF75DP51815 510 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ITGA1P56199 1179 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 RWDD2BP57060 319 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 KRT33BQ14525 404 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 PRPSAP1Q14558 356 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 POU6F1Q14863 301 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ZIC1Q15915 447 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 DBN1Q16643 649 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 PTCHD3Q3KNS1 767 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 FAM198BQ6UWH4 519 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 SYVN1Q86TM6 617 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 TRIM73Q86UV7 250 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 BPHLQ86WA6 291 aaPredicted RBP12.77□□□□□ -0.37
RPF1-201ENST00000370654 ADGRF3Q8IZF5 1079 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 DSELQ8IZU8 1212 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 ENDOVQ8N8Q3 282 aaKnown RBP12.77□□□□□ -0.37
RPF1-201ENST00000370654 ULK4Q96C45 1275 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 TRAPPC9Q96Q05 1148 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 CCM2Q9BSQ5 444 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 HGH1Q9BTY7 390 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 SRMSQ9H3Y6 488 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 FAM60AQ9NP50 221 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 PCMTD2Q9NV79 361 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 COLEC10Q9Y6Z7 277 aa12.77□□□□□ -0.37
RPF1-201ENST00000370654 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 C17orf113A0A1B0GUU1 675 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 NDUFS1P28331 727 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 NAP1L1P55209 391 aaKnown RBP12.76□□□□□ -0.37
RPF1-201ENST00000370654 FOXL2P58012 376 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 RPS15P62841 145 aaKnown RBP12.76□□□□□ -0.37
RPF1-201ENST00000370654 BOP1Q14137 746 aaKnown RBP12.76□□□□□ -0.37
RPF1-201ENST00000370654 BRD3Q15059 726 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 IZUMO3Q5VZ72 239 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 HIST2H2BCQ6DN03 193 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 CYB5D1Q6P9G0 228 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 CDHR3Q6ZTQ4 885 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 LMNTD1Q8N9Z9 388 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 OR5AR1Q8NGP9 310 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 CDKN2AIPNLQ96HQ2 116 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 PITPNM3Q9BZ71 974 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 ING2Q9H160 280 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 RBSNQ9H1K0 784 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 MLXIPLQ9NP71 852 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 LATS2Q9NRM7 1088 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 C1GALT1Q9NS00 363 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 NLE1Q9NVX2 485 aaPredicted RBP12.76□□□□□ -0.37
RPF1-201ENST00000370654 ICKQ9UPZ9 632 aa12.76□□□□□ -0.37
RPF1-201ENST00000370654 FER1L5A0AVI2 2057 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 BTNL10A8MVZ5 291 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 H7C0S8 307 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 MASP2O00187 686 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 TJP3O95049 919 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 FTCDO95954 541 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 RALBP11234 206 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 HADHAP40939 763 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 PRKAA1Q13131 559 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
RPF1-201ENST00000370654 PARP6Q2NL67 630 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 CCDC38Q502W7 563 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 PRR30Q53SZ7 412 aaPredicted RBP12.75□□□□□ -0.37
RPF1-201ENST00000370654 TMTC4Q5T4D3 741 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 ZNF385CQ66K41 422 aaPredicted RBP12.75□□□□□ -0.37
RPF1-201ENST00000370654 PRUNE1Q86TP1 453 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 ZBTB2Q8N680 514 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 FLVCR1-AS1Q8TAF5 88 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 SLC35B2Q8TB61 432 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 THAP4Q8WY91 577 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 TFGQ92734 400 aaPredicted RBP12.75□□□□□ -0.37
RPF1-201ENST00000370654 CLIP3Q96DZ5 547 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 LRFN5Q96NI6 719 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 TMEM121Q9BTD3 319 aa12.75□□□□□ -0.37
RPF1-201ENST00000370654 TFB2MQ9H5Q4 396 aaKnown RBP12.75□□□□□ -0.37
RPF1-201ENST00000370654 SPHK1Q9NYA1 384 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms