RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ACVR1Q04771 509 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 IFT88Q13099 833 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 PTK2BQ14289 1009 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 LINC00303Q3SY05 128 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 FASTKD1Q53R41 847 aaKnown RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 RALGPS1Q5JS13 557 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 LRRC73Q5JTD7 316 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 RNF187Q5TA31 235 aaPredicted RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 MACC1Q6ZN28 852 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 ZCCHC23Q6ZST2 131 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 KIAA0408Q6ZU52 694 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 OTOAQ7RTW8 1153 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 SPATA6LQ8N4H0 392 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 OR4L1Q8NH43 312 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 PPP1R14CQ8TAE6 165 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 KCTD4Q8WVF5 259 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 NAT6Q93015 286 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 FUBP1Q96AE4 644 aaKnown RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 CCDC97Q96F63 343 aaPredicted RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 LIN37Q96GY3 246 aaPredicted RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 CDKN2AIPNLQ96HQ2 116 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 SCYL1Q96KG9 808 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 TSNARE1Q96NA8 513 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 GPR63Q9BZJ6 419 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 FAM96AQ9H5X1 160 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 ATP13A3Q9H7F0 1226 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 CATSPERZQ9NTU4 200 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 FKBPLQ9UIM3 349 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 KIF26BQ2KJY2 2108 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 NEMP1O14524 444 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 TOR1BO14657 336 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 HGSO14964 777 aaPredicted RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 STX7O15400 261 aaKnown RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 TM7SF2O76062 418 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ANXA6P08133 673 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 SLC35E2BP0CK96 405 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 STMN1P16949 149 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 SERPINA4P29622 427 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ALDH3A1P30838 453 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 GLRBP48167 497 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 LEPRP48357 1165 aaKnown RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 CSNK1DP48730 415 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 RPIAP49247 311 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 THOP1P52888 689 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 RAB10P61026 200 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 INSCQ1MX18 579 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ALG11Q2TAA5 492 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 WSCD2Q2TBF2 565 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 CES4AQ5XG92 561 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 MRNIPQ6NTE8 343 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 AFTPHQ6ULP2 937 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 GDPD4Q6W3E5 623 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 CCDC81Q6ZN84 652 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 LYSMD3Q7Z3D4 306 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 TTC7BQ86TV6 843 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ARL14Q8N4G2 192 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 TTC30BQ8N4P2 665 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ANKS4BQ8N8V4 417 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 WDR48Q8TAF3 677 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 PIH1D2Q8WWB5 315 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 CCNL2Q96S94 520 aaPredicted RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 OLFM1Q99784 485 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 TSSK1BQ9BXA7 367 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 OSBPL1AQ9BXW6 950 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ZNF395Q9H8N7 513 aaPredicted RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 NPHS2Q9NP85 383 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 DKK3Q9UBP4 350 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ACSL6Q9UKU0 697 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 RUVBL2Q9Y230 463 aaKnown RBP9.8□□□□□ -0.84
TPM3-210ENST00000368530 CRYL1Q9Y2S2 319 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 PCDHGA7Q9Y5G6 932 aa9.8□□□□□ -0.84
TPM3-210ENST00000368530 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 UBA6A0AVT1 1052 aaPredicted RBP9.79□□□□□ -0.84
TPM3-210ENST00000368530 TRAFD1O14545 582 aaPredicted RBP9.79□□□□□ -0.84
TPM3-210ENST00000368530 PLD2O14939 933 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 GSTA1P08263 222 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 CPA3P15088 417 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 CRABP2P29373 138 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 SLC5A2P31639 672 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 MC4RP32245 332 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 UGT1A5P35504 534 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 CDKN1CP49918 316 aaPredicted RBP9.79□□□□□ -0.84
TPM3-210ENST00000368530 HK3P52790 923 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 CCL7P80098 99 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 BST1Q10588 318 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 SRSF6Q13247 344 aaKnown RBP9.79□□□□□ -0.84
TPM3-210ENST00000368530 SPIDRQ14159 915 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 PCLAFQ15004 111 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 AGERQ15109 404 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 TGIF1Q15583 401 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 TMEM52BQ4KMG9 183 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 ZRANB3Q5FWF4 1079 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 HECTD2Q5U5R9 776 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 SDCCAG8Q86SQ7 713 aaPredicted RBP9.79□□□□□ -0.84
TPM3-210ENST00000368530 ZSWIM9Q86XI8 627 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 C10orf107Q8IVU9 208 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 TRIM42Q8IWZ5 723 aa9.79□□□□□ -0.84
TPM3-210ENST00000368530 CNPY4Q8N129 248 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms