RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CLPTM1LQ96KA5 538 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 HSFY1Q96LI6 401 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 TMED9Q9BVK6 235 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CLEC4AQ9UMR7 237 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 SLC27A5Q9Y2P5 690 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 IRAK3Q9Y616 596 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 STRCP1A6NGW2 1772 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 SCN11AQ9UI33 1791 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 TCRBV21S2A2A0A5A6 115 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 OR14I1A6ND48 311 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 H3BN98 237 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 SSX4O60224 188 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 TRAPPC6AO75865 159 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 LSM8O95777 96 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 PABPC4LP0CB38 370 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF35P13682 527 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 LBPP18428 481 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CBX5P45973 191 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 RAP1GAPP47736 663 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 REEP5Q00765 189 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ECT2LQ008S8 904 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 RIPK1Q13546 671 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 LDLRAP1Q5SW96 308 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ARSKQ6UWY0 536 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 TMPPEQ6ZT21 453 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 C6orf120Q7Z4R8 191 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 HIPK1Q86Z02 1210 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 TCTEX1D2Q8WW35 142 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 FIG4Q92562 907 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 RSC1A1Q92681 617 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CAVIN3Q969G5 261 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 NACC2Q96BF6 587 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 OXNAD1Q96HP4 312 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 LMLNQ96KR4 655 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 FAM118BQ9BPY3 351 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ANKHQ9HCJ1 492 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 BIN3Q9NQY0 253 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 MRPL22Q9NWU5 206 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 KCNK4Q9NYG8 393 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 SQORQ9Y6N5 450 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ISPDA4D126 451 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 MKRN2OSH3BPM6 223 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 M0QX08 132 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 FFAR2O15552 330 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CST8O60676 142 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TRMUO75648 421 aaKnown RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 RBP1P09455 135 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CXCL8P10145 99 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 NCK1P16333 377 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TCN2P20062 427 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 VAMP1P23763 118 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PTDSS1P48651 473 aaKnown RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 GPR176Q14439 515 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 NR1I3Q14994 352 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CBWD6Q4V339 395 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 LIN52Q52LA3 116 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CARD16Q5EG05 197 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 BRMS1LQ5PSV4 323 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 SLC29A4Q7RTT9 530 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PLA2G15Q8NCC3 412 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 MAELQ96JY0 434 aaKnown RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TMEM209Q96SK2 561 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 OPA3Q9H6K4 179 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 EXD2Q9NVH0 621 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 RPS6KA6Q9UK32 745 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 NUDT5Q9UKK9 219 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PCDHB10Q9UN67 800 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CYP8B1Q9UNU6 501 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 MAP2K7O14733 419 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 KLF8O95600 359 aaPredicted RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 LPLP06858 475 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 BGNP21810 368 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 NME5P56597 212 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 ACY1Q03154 408 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 BMT2Q1RMZ1 405 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 MTFR2Q6P444 385 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 FRMD7Q6ZUT3 714 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 LINGO1Q96FE5 620 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 SNX27Q96L92 541 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 LRRC40Q9H9A6 602 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PNPLA3Q9NST1 481 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TAS2R13Q9NYV9 303 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 HSPB11Q9Y547 144 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 RGPD5Q99666 1765 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 FAM240BA0A1B0GVZ2 78 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 A8MUI8 341 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PSMD9O00233 223 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 ICMTO60725 284 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CDK14O94921 469 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 OR6B1O95007 311 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CYP1A2P05177 515 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 FCER2P06734 321 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 COX4I1P13073 169 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 STXBP1P61764 594 aaKnown RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CRY1Q16526 586 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 GPR107Q5VW38 600 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms