RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 NKX2-5P52952 324 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF420Q8TAQ5 688 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF597Q96LX8 424 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 TCF25Q9BQ70 676 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 STMN3Q9NZ72 180 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 AASSQ9UDR5 926 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 SPATA2Q9UM82 520 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 FUOMA2VDF0 154 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 CCDC182A6NF36 153 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 PER2O15055 1255 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 RASAL1O95294 804 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 IGSF6O95976 241 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 GLUD1P00367 558 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 PGRP06401 933 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 MAGEA8P43361 318 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 KCNQ1P51787 676 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 ELP6Q0PNE2 266 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 GALNT10Q86SR1 603 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 EPHX4Q8IUS5 362 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 C2orf73Q8N5S3 287 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 C1GALT1C1Q96EU7 318 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 KCNC2Q96PR1 638 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 FAIMQ9NVQ4 179 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 C1orf109Q9NX04 203 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 VPS51Q9UID3 782 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 UPK3BL1B0FP48 263 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 UPK3BL2E5RIL1 263 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 ALPIP09923 528 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 OGNP20774 298 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 GABRB3P28472 473 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 HPCAL1P37235 193 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TP53BP2Q13625 1128 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 RBM48Q5RL73 367 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 RNF180Q86T96 592 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 ANKFN1Q8N957 763 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 VANGL1Q8TAA9 524 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 PIH1D2Q8WWB5 315 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 FUNDC2Q9BWH2 189 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TNKS2Q9H2K2 1166 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TMEM9Q9P0T7 183 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 CRNNQ9UBG3 495 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF221Q9UK13 617 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 A0A0U1RQS6 177 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 MAFKO60675 156 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 S1PR4O95977 384 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 OR1D2P34982 312 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 OR4D1Q15615 310 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 OR4F3Q6IEY1 312 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 FAM131AQ6UXB0 335 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TRAPPC5Q8IUR0 188 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 DEPDC4Q8N2C3 294 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 ST13P5Q8NFI4 369 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TFAP2CQ92754 450 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 GKN1Q9NS71 199 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 SACM1LQ9NTJ5 587 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 CATP04040 527 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 BMP2P12643 396 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TNNI3P19429 210 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TALDO1P37837 337 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 DPP6P42658 865 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 HLCSP50747 726 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 STC1P52823 247 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 RPS3AP61247 264 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 RELAQ04206 551 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TUBB3Q13509 450 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 CPTPQ5TA50 214 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 DDI2Q5TDH0 399 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 DEF8Q6ZN54 512 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 PLEKHM3Q6ZWE6 761 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 LUZP2Q86TE4 346 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 SYVN1Q86TM6 617 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TMEM199Q8N511 208 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 TMEM40Q8WWA1 233 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 KIAA1191Q96A73 305 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 C16orf70Q9BSU1 422 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 OSGEPL1Q9H4B0 414 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 NUDT4Q9NZJ9 180 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 RNF11Q9Y3C5 154 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 MAP4K5Q9Y4K4 846 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 LYVE1Q9Y5Y7 322 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 A0A0G2JLL6 359 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 A8MV72 311 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 SERPINI2O75830 405 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 INMTO95050 263 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 CD1DP15813 335 aa13.66□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF26P17031 533 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 PRDX3P30048 256 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 LEPRP48357 1165 aaKnown RBP13.66□□□□□ -0.22
COL6A1-201ENST00000361866 CHIT1Q13231 466 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms