RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TMCO5AQ8N6Q1 288 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 C2orf69Q8N8R5 385 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 ATP6V0D2Q8N8Y2 350 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 OR2T12Q8NG77 320 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 CINPQ9BW66 212 aaPredicted RBP10.4□□□□□ -0.74
SMC3-201ENST00000361804 IPPKQ9H8X2 491 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 TMEM247A6NEH6 219 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 ANKRD28O15084 1053 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 SEC14L2O76054 403 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 CPNE6O95741 557 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 AKR1A1P14550 325 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 FLT3LGP49771 235 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 IL2P60568 153 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 IFITM3Q01628 133 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 TWF1Q12792 350 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 DUSP4Q13115 394 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 MAPK11Q15759 364 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 PHKG1Q16816 387 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 SLC16A12Q6ZSM3 486 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 DET1Q7L5Y6 550 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 THAP5Q7Z6K1 395 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 ZDHHC13Q8IUH4 622 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 RBM12BQ8IXT5 1001 aaKnown RBP10.4□□□□□ -0.74
SMC3-201ENST00000361804 SCML4Q8N228 414 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 SLC43A3Q8NBI5 491 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 ABHD11Q8NFV4 315 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 NDNFQ8TB73 568 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 NEURL2Q9BR09 285 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 VN1R3Q9BXE9 311 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 GPR62Q9BZJ7 368 aa10.4□□□□□ -0.74
SMC3-201ENST00000361804 PNMA8BQ9ULN7 279 aaPredicted RBP10.4□□□□□ -0.74
SMC3-201ENST00000361804 TNPO2O14787 897 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 TBC1D4O60343 1298 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 FTH1P02794 183 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 RPL17P18621 184 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 FAM189BP81408 668 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 SLC14A1Q13336 389 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 CTXN3Q4LDR2 81 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 FAM171A1Q5VUB5 890 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 BROXQ5VW32 411 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 GTF2IRD2BQ6EKJ0 949 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 CRTC3Q6UUV7 619 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 SUSD1Q6UWL2 747 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 FAM151BQ6UXP7 276 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 FRA10AC1Q70Z53 315 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 GALNT7Q86SF2 657 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 GTF2IRD2Q86UP8 949 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 CCDC138Q96M89 665 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 ASB2Q96Q27 587 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 MRGBPQ9NV56 204 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 KLQ9UEF7 1012 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 PRSS21Q9Y6M0 314 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 HELZP42694 1942 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 A8MU76 341 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 CFAP99D6REC4 459 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 AREL1O15033 823 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 INSIG1O15503 277 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 VPS26AO75436 327 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 E2F6O75461 281 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 GGT1P19440 569 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 OGNP20774 298 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 GP2P55259 537 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 FOXM1Q08050 763 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 MAPRE1Q15691 268 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 GPR162Q16538 588 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 C8orf59Q8N0T1 100 aaPredicted RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 NETO1Q8TDF5 533 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 ZFP90Q8TF47 636 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 FAM162AQ96A26 154 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 PPP1R2P1Q96PQ5 205 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 IL37Q9NZH6 218 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 RBMX2Q9Y388 322 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 RAI2Q9Y5P3 530 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 H0Y626 953 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 DEAF1O75398 565 aaPredicted RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 TRIM16O95361 564 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 RAP2AP10114 183 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 NEK2P51955 445 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 VBP1P61758 197 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 PHC1P78364 1004 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 FAM98BQ52LJ0 330 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 PDCD4Q53EL6 469 aaKnown RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 C6orf141Q5SZD1 244 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 ARMC12Q5T9G4 340 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 RGMBQ6NW40 437 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 LIX1Q8N485 282 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 ZNF420Q8TAQ5 688 aaPredicted RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 SLC47A1Q96FL8 570 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 INPP5KQ9BT40 448 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 TM6SF2Q9BZW4 377 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 ACTR8Q9H981 624 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 K7ERQ8 282 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 TNRC18O15417 2968 aaPredicted RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 ABCB7O75027 752 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 SH3BGRLO75368 114 aa10.39□□□□□ -0.75
SMC3-201ENST00000361804 CST5P28325 142 aaPredicted RBP10.39□□□□□ -0.75
SMC3-201ENST00000361804 CD97P48960 835 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms