RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PHF10Q8WUB8 498 aaKnown RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 PEX13Q92968 403 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 CDK15Q96Q40 435 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 HERPUD2Q9BSE4 406 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 CXCL16Q9H2A7 254 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 SLC32A1Q9H598 525 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 PRKAB1Q9Y478 270 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 DDX60LQ5H9U9 1706 aaKnown RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 GRXCR1A8MXD5 290 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 H3BQ06 376 aaPredicted RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 LIN7AO14910 233 aaPredicted RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 SUV39H1O43463 412 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 PAICSP22234 425 aaKnown RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 TMEM115Q12893 351 aaPredicted RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 PRAMEF14Q5SWL7 426 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 PRAMEF13Q5VWM6 474 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 UBR7Q8N806 425 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 GSDMCQ9BYG8 508 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 GALPQ9UBC7 116 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 HCFC2Q9Y5Z7 792 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 N4BP2Q86UW6 1770 aaPredicted RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 AP3D1O14617 1153 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 PCSK2P16519 638 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 NT5EP21589 574 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 AQP1P29972 269 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 ALDH4A1P30038 563 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 SLC26A3P40879 764 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 NIPAL4Q0D2K0 466 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 BIKQ13323 160 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 C1DQ13901 141 aaKnown RBP13.62□□□□□ -0.23
CTR9-201ENST00000361367 SLBPQ14493 270 aaKnown RBP eCLIP13.62□□□□□ -0.23
CTR9-201ENST00000361367 NCF4Q15080 339 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 GPR141Q7Z602 305 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 RELL1Q8IUW5 271 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 NRSN1Q8IZ57 195 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 MAGEL2Q9UJ55 1249 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 SLC22A14Q9Y267 594 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 PIAS3Q9Y6X2 628 aa13.62□□□□□ -0.23
CTR9-201ENST00000361367 GTPBP1O00178 669 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 KRT36O76013 467 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 ADSLP30566 484 aaPredicted RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 IDH2P48735 452 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 ARRB1P49407 418 aaPredicted RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 PTPN5P54829 565 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 RPS14P62263 151 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 ADRM1Q16186 407 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 SMPDL3AQ92484 453 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 MRPL48Q96GC5 212 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 SMAD5Q99717 465 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 CITO14578 2027 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 PEX1O43933 1283 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 FAM20BO75063 409 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 CLPTM1O96005 669 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 SRPRAP08240 638 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 SMIM11AP58511 58 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 NFKB2Q00653 900 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 USP39Q53GS9 565 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 TMEM145Q8NBT3 493 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 GSTCDQ8NEC7 633 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 USP3Q9Y6I4 520 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 CCR8P51685 355 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 PAOXQ6QHF9 649 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 RALGPS2Q86X27 583 aaPredicted RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 FBXW8Q8N3Y1 598 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 DERL2Q9GZP9 239 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 LRCH1Q9Y2L9 728 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 PHIPQ8WWQ0 1821 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 NUP107P57740 925 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 CREB5Q02930 508 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 PAQR9Q6ZVX9 377 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 ANKRD46Q86W74 232 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 OFCC1Q8IZS5 231 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 SCML4Q8N228 414 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 TTC29Q8NA56 475 aaPredicted RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 METTL21AQ8WXB1 218 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 POP5Q969H6 163 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 RMND5BQ96G75 393 aaPredicted RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 RBM18Q96H35 190 aaKnown RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 HIC2Q96JB3 615 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 RSPH9Q9H1X1 276 aaPredicted RBP13.61□□□□□ -0.23
CTR9-201ENST00000361367 SLC2A4RGQ9NR83 387 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 GDE1Q9NZC3 331 aa13.61□□□□□ -0.23
CTR9-201ENST00000361367 CST1P01037 141 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 BDKRB1P46663 353 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 FOXM1Q08050 763 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 MGAT3Q09327 533 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 RALGDSQ12967 914 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 SEMA3AQ14563 771 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 VN1R5Q7Z5H4 357 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 KIAA1191Q96A73 305 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 KLHDC7BQ96G42 594 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 SAMHD1Q9Y3Z3 626 aaKnown RBP13.6□□□□□ -0.23
CTR9-201ENST00000361367 H3BNH8 94 aa13.6□□□□□ -0.23
CTR9-201ENST00000361367 MAN2B1O00754 1011 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms