RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 REM1O75628 298 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PERM1Q5SV97 790 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 HFE2Q6ZVN8 426 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PJA1Q8NG27 643 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 OVCA2Q8WZ82 227 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PTCD3Q96EY7 689 aaKnown RBP19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TLR6Q9Y2C9 796 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 CASKO14936 926 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 NIPSNAP2O75323 286 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 CAPZA1P52907 286 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TSTD2Q5T7W7 516 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 SMYD5Q6GMV2 418 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 NUP54Q7Z3B4 507 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 FBXW8Q8N3Y1 598 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 FOSL2P15408 326 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 SPIRE1Q08AE8 756 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 ADRM1Q16186 407 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 GALNT18Q6P9A2 607 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 NLGN4XQ8N0W4 816 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TBL1XR1Q9BZK7 514 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 GRXCR1A8MXD5 290 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PRR5-ARHGAP8B1AHC4 643 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 RNF225M0QZC1 329 aaPredicted RBP19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 KRT36O76013 467 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 CDKN2BP42772 138 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 EIF2B2P49770 351 aaKnown RBP19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 ARHGAP8P85298 464 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PITRM1Q5JRX3 1037 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 ALG1LQ6GMV1 187 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 SLC29A4Q7RTT9 530 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 SLC22A17Q8WUG5 538 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 CLPTM1LQ96KA5 538 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 BATF3Q9NR55 127 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 SDC3O75056 442 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TMCC2O75069 709 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 RLN1P04808 185 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PRRT3Q5FWE3 981 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 WASHC2DQ5SRD0 308 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 COQ8BQ96D53 544 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TEFMQ96QE5 360 aaKnown RBP19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 LEFTY2O00292 366 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 DHX15O43143 795 aaKnown RBP19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TNFRSF21O75509 655 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 HLA-DQB2P05538 268 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PRR5P85299 388 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 SIM2Q14190 667 aaPredicted RBP19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 HGSNATQ68CP4 663 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 TCEAL6Q6IPX3 200 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 PIK3C3Q8NEB9 887 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 HIST1H2AAQ96QV6 131 aa19.97■□□□□ 0.79
CDC42BPB-201ENST00000361246 FZD9O00144 591 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SASH3O75995 380 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 KLK3P07288 261 aaPredicted RBP19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 KLK1P06870 262 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 TPGS2Q68CL5 300 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 GPR174Q9BXC1 333 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SEC61A2Q9H9S3 476 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 IGLV3-22A0A075B6J6 115 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 GHRHRQ02643 423 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 PAOXQ6QHF9 649 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SUSD1Q6UWL2 747 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 OR6K6Q8NGW6 343 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SLC35G5Q96KT7 338 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 DNAAF2Q9NVR5 837 aaKnown RBP19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SSR3Q9UNL2 185 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 MFHAS1Q9Y4C4 1052 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 VNN1O95497 513 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 AP1S1P61966 158 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SPATA19Q7Z5L4 167 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 MPP5Q8N3R9 675 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 PSMA8Q8TAA3 256 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 TPSD1Q9BZJ3 242 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 TULP2O00295 520 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 ZNF823P16415 610 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 YBEYP58557 167 aaPredicted RBP19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 GPR107Q5VW38 600 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 GLYATQ6IB77 296 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 SPATC1Q76KD6 591 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 DEPDC4Q8N2C3 294 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 ZSCAN1Q8NBB4 408 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 PHC3Q8NDX5 983 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 TMEM209Q96SK2 561 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 NKIRAS2Q9NYR9 191 aa19.96■□□□□ 0.79
CDC42BPB-201ENST00000361246 LAMTOR5O43504 91 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 CCR8P51685 355 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 MYBPC3Q14896 1274 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 ARMC3Q5W041 872 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 PGBD2Q6P3X8 592 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 DOK4Q8TEW6 326 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 NUDT4Q9NZJ9 180 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 AP3M1Q9Y2T2 418 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 CCDC162PA2VCL2 907 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 PIP5K1BO14986 540 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 WFS1O76024 890 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 IL12RB1P42701 662 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 GRK6P43250 576 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 GKN2Q86XP6 184 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 MTMR14Q8NCE2 650 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 C2orf15Q8WU43 125 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms