RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 FUNDC2Q9BWH2 189 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 SLC6A13Q9NSD5 602 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ZNF490Q9ULM2 529 aaPredicted RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 GABRQQ9UN88 632 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 MKI67P46013 3256 aaKnown RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 AXIN1O15169 862 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 SLC25A14O95258 325 aaPredicted RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 SERPINA1P01009 418 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 CRHBPP24387 322 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 PHKG1Q16816 387 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 RASAL3Q86YV0 1011 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 RIMKLAQ8IXN7 391 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 LKAAEAR1Q8TD35 194 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 TADA1Q96BN2 335 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 MGME1Q9BQP7 344 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 UGT2B28Q9BY64 529 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 CLPBQ9H078 707 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 PRDM8Q9NQV8 689 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 PNMA8BQ9ULN7 279 aaPredicted RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 EIF3LQ9Y262 564 aaKnown RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 NLRC5Q86WI3 1866 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ANKRD36A6QL64 1941 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ELOVL7A1L3X0 281 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 K7ERQ8 282 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 CXCR6O00574 342 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ABCB7O75027 752 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 IMPDH2P12268 514 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 PFKLP17858 780 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 GGT1P19440 569 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 CTGFP29279 349 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 MAP2K4P45985 399 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 MAPKAPK2P49137 400 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 SLC11A2P49281 568 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 TAF12Q16514 161 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 TRIM16LQ309B1 348 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 COQ5Q5HYK3 327 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ARMC12Q5T9G4 340 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 DHRS4L2Q6PKH6 230 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 USP51Q70EK9 711 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 PNPT1Q8TCS8 783 aaKnown RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 GLMNQ92990 594 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 FAM120BQ96EK7 910 aaKnown RBP11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ZNF382Q96SR6 550 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 SYT17Q9BSW7 474 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ADGRE3Q9BY15 652 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 ASB8Q9H765 288 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 FNIP2Q9P278 1114 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 DAPK2Q9UIK4 370 aa11.92□□□□□ -0.5
CLIP3-201ENST00000360535 MTMR11A4FU01 709 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 OAZ2O95190 189 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 C1QCP02747 245 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 CORO1AP31146 461 aaKnown RBP11.91□□□□□ -0.5
CLIP3-201ENST00000360535 OPRL1P41146 370 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 RHOAP61586 193 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 DSC3Q14574 896 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 XAF1Q6GPH4 301 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 C10orf111Q8N326 155 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 ADAMTS16Q8TE57 1224 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 TRIB2Q92519 343 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 WBP2Q969T9 261 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 PYCR2Q96C36 320 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 OLA1Q9NTK5 396 aaKnown RBP11.91□□□□□ -0.5
CLIP3-201ENST00000360535 PSME2Q9UL46 239 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 FUOMA2VDF0 154 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 TMEM247A6NEH6 219 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 TRIM64CA6NLI5 447 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 C16orf96A6NNT2 1141 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 LOC730098B7Z3J9 87 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 ULK1O75385 1050 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 ELNP15502 786 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 MZF1P28698 734 aaPredicted RBP11.91□□□□□ -0.5
CLIP3-201ENST00000360535 RXRGP48443 463 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 AQP6Q13520 282 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 MOGQ16653 247 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 UTS2BQ765I0 119 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 SERPINA9Q86WD7 417 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 RNF175Q8N4F7 328 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 NETO1Q8TDF5 533 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 RHNO1Q9BSD3 238 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 FEM1AQ9BSK4 669 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 MUC13Q9H3R2 512 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 RASSF1Q9NS23 344 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 OPTCQ9UBM4 332 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 PRSS21Q9Y6M0 314 aa11.91□□□□□ -0.5
CLIP3-201ENST00000360535 hCG_2039718K7EN88 272 aa11.9□□□□□ -0.5
CLIP3-201ENST00000360535 PRMT5O14744 637 aaPredicted RBP11.9□□□□□ -0.5
CLIP3-201ENST00000360535 RAD51BO15315 384 aa11.9□□□□□ -0.5
CLIP3-201ENST00000360535 KLKB1P03952 638 aa11.9□□□□□ -0.5
CLIP3-201ENST00000360535 PGRP06401 933 aa11.9□□□□□ -0.5
CLIP3-201ENST00000360535 PSMB9P28065 219 aa11.9□□□□□ -0.5
CLIP3-201ENST00000360535 HTR1BP28222 390 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms