RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 TMEM233B4DJY2 109 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 SUPT3HB4E1H0 165 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 NDUFB5O43674 189 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 JUNP05412 331 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 ACRV1P26436 265 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 CD97P48960 835 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 CCINQ13939 588 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 HERC3Q15034 1050 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 TSNQ15631 228 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 TMEM198Q66K66 360 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 NXNQ6DKJ4 435 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 KIAA1211LQ6NV74 962 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 Q6ZS52 159 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 NANOGNBQ7Z5D8 188 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 RP9Q8TA86 221 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 EXT2Q93063 718 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 CDRT15Q96T59 188 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 COPS7BQ9H9Q2 264 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 PRSS16Q9NQE7 514 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 IL36AQ9UHA7 158 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 ZNF106Q9H2Y7 1883 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 A8MX80 341 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 BTN3A1O00481 513 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 UBFD1O14562 309 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 ADAM23O75077 832 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 KLF8O95600 359 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 PABPC4LP0CB38 370 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 SMIM18P0DKX4 95 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 GLULP15104 373 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 XRCC1P18887 633 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 TCN1P20061 433 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 PIK3R1P27986 724 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 THOP1P52888 689 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 PTRHD1Q6GMV3 140 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 CHSY3Q70JA7 882 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 SIX5Q8N196 739 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 GALNT4Q8N4A0 578 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 RPLP0P6Q8NHW5 317 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 LINGO1Q96FE5 620 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 CDC7O00311 574 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 PLK4O00444 970 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 ENO3P13929 434 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 ANKS6Q68DC2 871 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 GDPD4Q6W3E5 623 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 ZNF852Q6ZMS4 543 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 RPS27LQ71UM5 84 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 MMAAQ8IVH4 418 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 GJD3Q8N144 294 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 PELI3Q8N2H9 469 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 FAM156AQ8NDB6 213 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CATSPER2Q96P56 530 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 FAM129BQ96TA1 746 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 FOXQ1Q9C009 403 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 TNFRSF12AQ9NP84 129 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CRLS1Q9UJA2 301 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 RPS17P08708 135 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 NTSR1P30989 418 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 ENPP2Q13822 863 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 ELAVL3Q14576 367 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CHRNA6Q15825 494 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CRY1Q16526 586 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 OGFRL1Q5TC84 451 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 IYDQ6PHW0 289 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 BRAT1Q6PJG6 821 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 MACC1Q6ZN28 852 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 TSPAN33Q86UF1 283 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 GPSM1Q86YR5 675 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CPNE9Q8IYJ1 553 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 PQLC1Q8N2U9 271 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 RCN3Q96D15 328 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 GRIP2Q9C0E4 1043 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CKAP5Q14008 2032 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 SCN8AQ9UQD0 1980 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 HTR3EA5X5Y0 456 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 CDK14O94921 469 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 EEF1DP29692 281 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 SH3BP2P78314 561 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 FLOT2Q14254 428 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 LRRC66Q68CR7 880 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 NXPE1Q8N323 547 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 GPR26Q8NDV2 337 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 PIP4K2CQ8TBX8 421 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 OR8D1Q8WZ84 308 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 PHF12Q96QT6 1004 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 SLC6A17Q9H1V8 727 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 ZBTB26Q9HCK0 441 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 LATS2Q9NRM7 1088 aa13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 DDX18Q9NVP1 670 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-201ENST00000359867 GPR39O43194 453 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 SIX3O95343 332 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 HOXB2P14652 356 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms