RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 IFNA16P05015 189 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 GPM6BQ13491 265 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 ZNF697Q5TEC3 545 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 MED27Q6P2C8 311 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 CHST9Q7L1S5 443 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 TAC4Q86UU9 113 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 RELL1Q8IUW5 271 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 ZNF248Q8NDW4 579 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 TMCO6Q96DC7 493 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 C1orf109Q9NX04 203 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 CALML5Q9NZT1 146 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 MRPS33Q9Y291 106 aaKnown RBP12.04□□□□□ -0.48
DNMT1-202ENST00000359526 FAM149AA5PLN7 773 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 SLC38A8A6NNN8 435 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 CCNB2O95067 398 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 S100A6P06703 90 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 CDH1P12830 882 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 SSR2P43308 183 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 SLC13A3Q8WWT9 602 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 LRRC3Q9BY71 257 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 PCBD2Q9H0N5 130 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 MAGEE1Q9HCI5 957 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 TRPV5Q9NQA5 729 aa12.04□□□□□ -0.48
DNMT1-202ENST00000359526 SLC25A12O75746 678 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 POP4O95707 220 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ANXA4P09525 319 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ITPKAP23677 461 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 BLKP51451 505 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 SNAPC1Q16533 368 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 KLHDC10Q6PID8 442 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ZNF783Q6ZMS7 281 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 CEP68Q76N32 757 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 OR8H1Q8NGG4 311 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ADAMTS15Q8TE58 950 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 FEM1CQ96JP0 617 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TCF25Q9BQ70 676 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 FBRSQ9HAH7 460 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 CFAP97Q9P2B7 532 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 GPSM3Q9Y4H4 160 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 PDLIM1O00151 329 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 OR5F1O95221 314 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 C1RP00736 705 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 RPLP0P05388 317 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 AOC1P19801 751 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TAS2R39P59534 338 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 HERVK_113P63132 956 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ERVK-8P63133 956 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 PHC1P78364 1004 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 SLC18A2Q05940 514 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 MERTKQ12866 999 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TARBP2Q15633 366 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 RASSF6Q6ZTQ3 369 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TMEM126BQ8IUX1 230 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 LIX1Q8N485 282 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 KREMEN2Q8NCW0 462 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 SPATA22Q8NHS9 363 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 SLC38A4Q969I6 547 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 DIRAS2Q96HU8 199 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ZNF514Q96K75 400 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 NSMCE3Q96MG7 304 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 XPNPEP1Q9NQW7 623 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 MRTO4Q9UKD2 239 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 MAGEB17A8MXT2 336 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 H3BNH8 94 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 C9P02748 559 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 LARS2Q15031 903 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 VARS2Q5ST30 1063 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 RPTNQ6XPR3 784 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ZNF730Q6ZMV8 503 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TIFABQ6ZNK6 161 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 AHSA2Q719I0 299 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 PYROXD2Q8N2H3 581 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TPK1Q9H3S4 243 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ZNF487B1APH4 448 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 SLC22A1O15245 554 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 ERN1O75460 977 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 PSIP1O75475 530 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 OR4F21O95013 312 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 LDOC1O95751 146 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 CORO1AP31146 461 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 C2orf80Q0P641 193 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 IL18Q14116 193 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 KCNJ11Q14654 390 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 TRMT10BQ6PF06 316 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 CELF5Q8N6W0 485 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 FAM98AQ8NCA5 519 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 RNASE11Q8TAA1 199 aaKnown RBP12.03□□□□□ -0.48
DNMT1-202ENST00000359526 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 DHRS7Q9Y394 339 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 PCDHGA4Q9Y5G9 962 aa12.03□□□□□ -0.48
DNMT1-202ENST00000359526 A0A1W2PQ45 241 aaPredicted RBP12.02□□□□□ -0.48
DNMT1-202ENST00000359526 A0A1W2PQY0 241 aa12.02□□□□□ -0.48
DNMT1-202ENST00000359526 PGRP06401 933 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms