RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZNF627Q7L945 461 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 OTOP2Q7RTS6 562 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 MSL3Q8N5Y2 521 aaKnown RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 IRGQQ8WZA9 623 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 SLC38A3Q99624 504 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 TVP23BQ9NYZ1 205 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 RCOR3Q9P2K3 495 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 OR14I1A6ND48 311 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 PGAM2P15259 253 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 FUT4P22083 530 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ARF3P61204 181 aaPredicted RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ARF1P84077 181 aaKnown RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 COX18Q8N8Q8 333 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 POF1BQ8WVV4 589 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 UFD1Q92890 307 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 HIST1H2AAQ96QV6 131 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 SEPT4O43236 478 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 DQX1Q8TE96 717 aaKnown RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 C7orf26Q96N11 449 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 TOR3AQ9H497 397 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 REXO2Q9Y3B8 237 aaKnown RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 LIMK2P53671 638 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 CAP1Q01518 475 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ADGRD1Q6QNK2 874 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 SVOPLQ8N434 492 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ARL14EPQ8N8R7 260 aaPredicted RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 PADI3Q9ULW8 664 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 VITQ6UXI7 678 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 LNX2Q8N448 690 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 RPL10LQ96L21 214 aaKnown RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 MRPS30Q9NP92 439 aaKnown RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ERVW-1Q9UQF0 538 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 KIF1AQ12756 1690 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ROBO3Q96MS0 1386 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 ADAMDEC1O15204 470 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 MATN3O15232 486 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 SEMG2Q02383 582 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 SLC22A15Q8IZD6 547 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 FAM156AQ8NDB6 213 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 NAT14Q8WUY8 206 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 TCF7L1Q9HCS4 588 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 PNO1Q9NRX1 252 aaKnown RBP18.11■□□□□ 0.49
SHANK1-202ENST00000359082 FZD10Q9ULW2 581 aa18.11■□□□□ 0.49
SHANK1-202ENST00000359082 PLA2G16P53816 162 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TSTD2Q5T7W7 516 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TAC4Q86UU9 113 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ZZZ3Q8IYH5 903 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 DNAJA4Q8WW22 397 aaPredicted RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 DMRTB1Q96MA1 342 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 LGR4Q9BXB1 951 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TMEM165Q9HC07 324 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TIMMDC1Q9NPL8 285 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ARL5CA6NH57 179 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CYB5AP00167 134 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 MMP8P22894 467 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ADNP2Q6IQ32 1131 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 FSTL4Q6MZW2 842 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CPNE9Q8IYJ1 553 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 GJD3Q8N144 294 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 RASSF5Q8WWW0 418 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ESAMQ96AP7 390 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 SCELO95171 688 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 S100A1P23297 94 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CLCN7P51798 805 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 NCBP2P52298 156 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CRTC2Q53ET0 693 aaPredicted RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 RALGPS1Q5JS13 557 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 HID1Q8IV36 788 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 PCED1BQ96HM7 432 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 SDCBP2Q9H190 292 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 DNAAF2Q9NVR5 837 aaKnown RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 HCN3Q9P1Z3 774 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ERVK-11Q9UQG0 969 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ALPPP05187 535 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CPN2P22792 545 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 MAZP56270 477 aaKnown RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ADAM17P78536 824 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 SP2Q02086 613 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 KLF1Q13351 362 aaPredicted RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 PUS10Q3MIT2 529 aaKnown RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 HSDL1Q3SXM5 330 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ZNF311Q5JNZ3 666 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 QSOX2Q6ZRP7 698 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ZDHHC21Q8IVQ6 265 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 PPP1R14BQ96C90 147 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 INPP4AQ96PE3 977 aaPredicted RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CTPS2Q9NRF8 586 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 FAM237AA0A1B0GTK4 181 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TPD52L2O43399 206 aaKnown RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TULP3O75386 442 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 PRKCHP24723 683 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 FMO3P31513 532 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 MTPNP58546 118 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 ECT2LQ008S8 904 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 MSANTD1Q6ZTZ1 278 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 C15orf52Q6ZUT6 534 aaKnown RBP18.1■□□□□ 0.49
SHANK1-202ENST00000359082 SLC24A5Q71RS6 500 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 NUP54Q7Z3B4 507 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms