RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 GLAP06280 429 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ERP29P30040 261 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 OXTRP30559 389 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 RFX2P48378 723 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 SCRN3Q0VDG4 424 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TNK1Q13470 666 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 MBTPS1Q14703 1052 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 Q3ZCU0 254 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 RETSATQ6NUM9 610 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 GK5Q6ZS86 529 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PRSS48Q7RTY5 328 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 GPAT4Q86UL3 456 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 LIX1LQ8IVB5 337 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 UBA3Q8TBC4 463 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCNPQ8WW12 178 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 RSAD2Q8WXG1 361 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CLP1Q92989 425 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF689Q96CS4 500 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 LRRC39Q96DD0 335 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 YIPF6Q96EC8 236 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TTPALQ9BTX7 342 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 SDCBP2Q9H190 292 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZCCHC4Q9H5U6 513 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CATSPERBQ9H7T0 1116 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ENTPD7Q9NQZ7 604 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CD274Q9NZQ7 290 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 USP22Q9UPT9 525 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TNFSF13BQ9Y275 285 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCDHGA9Q9Y5G4 932 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 HEATR9A2RTY3 570 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 GRAP2O75791 330 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLC22A5O76082 557 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 APOA1P02647 267 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 DARSP14868 501 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 AGXTP21549 392 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 IL1R2P27930 398 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CD52P31358 61 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CCR10P46092 362 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ERVFC1P60507 584 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ABRQ12979 859 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 STARD3Q14849 445 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TMEM132DQ14C87 1099 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PTCHD3Q3KNS1 767 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TAF2Q6P1X5 1199 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TRMT10BQ6PF06 316 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 C15orf39Q6ZRI6 1047 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TSPYL5Q86VY4 417 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLC35B2Q8TB61 432 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PTP4A1Q93096 173 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 FAM149B1Q96BN6 582 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 RPL10LQ96L21 214 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ING2Q9H160 280 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 OR51B5Q9H339 312 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLC28A3Q9HAS3 691 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 MRM3Q9HC36 420 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PNPLA8Q9NP80 782 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 SDHAF3Q9NRP4 125 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 EHD3Q9NZN3 535 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 MAPRE3Q9UPY8 281 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ACOT9Q9Y305 439 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCDHGB6Q9Y5F9 930 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CITO14578 2027 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 RAB19A4D1S5 217 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CARNS1A5YM72 827 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PIGRP01833 764 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 C2P06681 752 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 C7P10643 843 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 IL10P22301 178 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 RGS7P49802 495 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ERVK-8P63133 956 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 EMX1Q04741 257 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 MEP1AQ16819 746 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TCTN1Q2MV58 587 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 TIGD5Q53EQ6 642 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 C10orf62Q5T681 223 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 LRRC8EQ6NSJ5 796 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 LRFN4Q6PJG9 635 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 DHFR2Q86XF0 187 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 LINC01465Q8N7H1 131 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 KDM1BQ8NB78 822 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 HDAC10Q969S8 669 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CENPNQ96H22 339 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PAAF1Q9BRP4 392 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 C1QTNF1Q9BXJ1 281 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 CYP3A43Q9HB55 503 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 COQ4Q9Y3A0 265 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 GRIP1Q9Y3R0 1128 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCDHB3Q9Y5E6 796 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCDHB12Q9Y5F1 795 aa9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 COPG1Q9Y678 874 aaKnown RBP9.16□□□□□ -0.94
SMARCAL1-202ENST00000358207 A0A0B4J293 547 aa9.15□□□□□ -0.94
SMARCAL1-202ENST00000358207 METTL15A6NJ78 407 aa9.15□□□□□ -0.94
SMARCAL1-202ENST00000358207 BTN3A1O00481 513 aa9.15□□□□□ -0.94
SMARCAL1-202ENST00000358207 TFECO14948 347 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-202ENST00000358207 ASS1P00966 412 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-202ENST00000358207 EPOP01588 193 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms