RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 HTR6P50406 440 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 OXCT1P55809 520 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 DSC1Q08554 894 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 TRAF3Q13114 568 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 RFTN2Q52LD8 501 aaPredicted RBP17.39■□□□□ 0.38
RTN4-204ENST00000357732 CERS6Q6ZMG9 384 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 MICU2Q8IYU8 434 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 TMCO5AQ8N6Q1 288 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 FAM162AQ96A26 154 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 SPATA17Q96L03 361 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 THUMPD3Q9BV44 507 aaKnown RBP17.39■□□□□ 0.38
RTN4-204ENST00000357732 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.39■□□□□ 0.38
RTN4-204ENST00000357732 STX7O15400 261 aaKnown RBP17.39■□□□□ 0.37
RTN4-204ENST00000357732 DFNA5O60443 496 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 NDUFS2O75306 463 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 HTR1BP28222 390 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 GRK4P32298 578 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 DGKQP52824 942 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 CXCR4P61073 352 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 ITGADQ13349 1161 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 CTF1Q16619 201 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 MEP1AQ16819 746 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 CTU2Q2VPK5 515 aaKnown RBP17.39■□□□□ 0.37
RTN4-204ENST00000357732 RUNDC3AQ59EK9 446 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 CACHD1Q5VU97 1274 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 ENPP6Q6UWR7 440 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 MILR1Q7Z6M3 343 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 GPR152Q8TDT2 470 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 ZNF641Q96N77 438 aaPredicted RBP17.39■□□□□ 0.37
RTN4-204ENST00000357732 CDK15Q96Q40 435 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 SMURF2Q9HAU4 748 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 AKIP1Q9NQ31 210 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 FKBPLQ9UIM3 349 aa17.39■□□□□ 0.37
RTN4-204ENST00000357732 MAGED1Q9Y5V3 778 aaPredicted RBP17.39■□□□□ 0.37
RTN4-204ENST00000357732 ANKRD66B4E2M5 251 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ERN1O75460 977 aaKnown RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 PIGAP37287 484 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 DCTP40126 519 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ARL1P40616 181 aaPredicted RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 SERPINB10P48595 397 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 HNRNPFP52597 415 aaKnown RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 SPCS2Q15005 226 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ABRAXAS2Q15018 415 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 IMPG1Q17R60 797 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 VARS2Q5ST30 1063 aaKnown RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 SPESP1Q6UW49 350 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 SBSNQ6UWP8 590 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 TRIM46Q7Z4K8 759 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 FAM9CQ8IZT9 166 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 LGI2Q8N0V4 545 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 OR10A6Q8NH74 314 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 FBXO30Q8TB52 745 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 SOCS4Q8WXH5 440 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ESAMQ96AP7 390 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 C19orf43Q9BQ61 176 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 DPY30Q9C005 99 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 GABARAPL1Q9H0R8 117 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 IPPKQ9H8X2 491 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 CARS2Q9HA77 564 aaKnown RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 PCDHGA4Q9Y5G9 962 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 CPQQ9Y646 472 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 A0A0D9SEW6 157 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 OR6C75A6NL08 312 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 FFAR2O15552 330 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ZDHHC11BP0C7U3 371 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 OPRL1P41146 370 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 CDKN1CP49918 316 aaPredicted RBP17.38■□□□□ 0.37
RTN4-204ENST00000357732 CCR3P51677 355 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 MLLT10P55197 1068 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 CACNG1Q06432 222 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 TAF10Q12962 218 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 AQP6Q13520 282 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 DPY19L1Q2PZI1 675 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ZRANB3Q5FWF4 1079 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 GLB1LQ6UWU2 654 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 FAM86B1Q8N7N1 296 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 ARL10Q8N8L6 244 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 RHBDF1Q96CC6 855 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 INVSQ9Y283 1065 aa17.38■□□□□ 0.37
RTN4-204ENST00000357732 TRBV5-3A0A0A0MS03 114 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 PRMT5O14744 637 aaPredicted RBP17.37■□□□□ 0.37
RTN4-204ENST00000357732 OR1I1O60431 355 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 NTRK1P04629 796 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 PGRP06401 933 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 HMBSP08397 361 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 SLC2A4P14672 509 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 JUNDP17535 347 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 GRK3P35626 688 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 GP2P55259 537 aaKnown RBP17.37■□□□□ 0.37
RTN4-204ENST00000357732 RPS3AP61247 264 aaKnown RBP17.37■□□□□ 0.37
RTN4-204ENST00000357732 NKG7Q16617 165 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 LAIR2Q6ISS4 152 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 RBM23Q86U06 439 aaKnown RBP17.37■□□□□ 0.37
RTN4-204ENST00000357732 ZNF280BQ86YH2 543 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 PLPP6Q8IY26 295 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 LPCAT1Q8NF37 534 aa17.37■□□□□ 0.37
RTN4-204ENST00000357732 KAT8Q9H7Z6 458 aaKnown RBP17.37■□□□□ 0.37
RTN4-204ENST00000357732 FBXO8Q9NRD0 319 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms