RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 IFT88Q13099 833 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 C18orf21Q32NC0 220 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ARL13AQ5H913 290 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 CFAP157Q5JU67 520 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 MBOAT1Q6ZNC8 495 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 Q6ZSR6 202 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 YTHDF3Q7Z739 585 aaKnown RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PDPRQ8NCN5 879 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 OR13H1Q8NG92 308 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 OR56A4Q8NGH8 313 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 OR1E3Q8WZA6 343 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 SNX19Q92543 992 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ILKAPQ9H0C8 392 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 GSTO2Q9H4Y5 243 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 RDH14Q9HBH5 336 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 SPATA6Q9NWH7 488 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 RAP2CQ9Y3L5 183 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PLEKHM1Q9Y4G2 1056 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ASB1Q9Y576 335 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PRSS38A1L453 326 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 H3BM21 787 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 STX16-NPEPL1H3BU86 382 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 STX16O14662 325 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PSIP1O75475 530 aaKnown RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ALOX15P16050 662 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 VCLP18206 1134 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 BCKDHBP21953 392 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 NUDT1P36639 197 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ARFIP2P53365 341 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 YPEL5P62699 121 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PRKAA1Q13131 559 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 SP140Q13342 867 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 SETDB1Q15047 1291 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 TSSK4Q6SA08 328 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ENPP7Q6UWV6 458 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 CHST15Q7LFX5 561 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 TRPM8Q7Z2W7 1104 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 RAB44Q7Z6P3 723 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PDXPQ96GD0 296 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 RMDN2Q96LZ7 410 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 WDR92Q96MX6 357 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PCED1AQ9H1Q7 454 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 OR52A5Q9H2C5 316 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 PARVBQ9HBI1 364 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ATXN2Q99700 1313 aaKnown RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 A0A0G2JND7 137 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 KRT87PA6NCN2 255 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 PRR19A6NJB7 356 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 ARHGEF33A8MVX0 844 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 SLC16A5O15375 505 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 SNX2O60749 519 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 GUCA1CO95843 209 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 ACP5P13686 325 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 EEF1DP29692 281 aaKnown RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 GNPDA1P46926 289 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 HK2P52789 917 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 METRNLQ641Q3 311 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 FRMD7Q6ZUT3 714 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 GALNT13Q8IUC8 556 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 SLC22A18ASQ8N1D0 253 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 CADM4Q8NFZ8 388 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 CFAP61Q8NHU2 1237 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 ESAMQ96AP7 390 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 NSUN5Q96P11 429 aaKnown RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 UHRF1Q96T88 793 aaPredicted RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 TIMM29Q9BSF4 260 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 TMEM120AQ9BXJ8 343 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 DPEP2Q9H4A9 486 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 STN1Q9H668 368 aaKnown RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 MARCOQ9UEW3 520 aaPredicted RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 MOSPD1Q9UJG1 213 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 PTBP2Q9UKA9 531 aaKnown RBP17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 ST14Q9Y5Y6 855 aa17.73■□□□□ 0.43
SMARCD3-202ENST00000356800 CCT8L1PA6NM43 557 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 SCAMP1O15126 338 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 TAPBPO15533 448 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 SUPT7LO94864 414 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 RPS17P08708 135 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 ENO2P09104 434 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 KITP10721 976 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 TDGF1P13385 188 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 KELP23276 732 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 ACADLP28330 430 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 HOXA6P31267 233 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 RABIFP47224 123 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 RPIAP49247 311 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 NAA20P61599 178 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 PLOD1Q02809 727 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 RPL6Q02878 288 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 DMPKQ09013 629 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 RPA4Q13156 261 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 ZNF781Q8N8C0 355 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 SPDYE1Q8NFV5 336 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 RHBDF1Q96CC6 855 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 SLC6A18Q96N87 628 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 C1QTNF3Q9BXJ4 246 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 CARS2Q9HA77 564 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms