RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 KRT33BQ14525 404 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 TSNQ15631 228 aaKnown RBP12.89□□□□□ -0.35
RAP1A-201ENST00000356415 CCDC153Q494R4 210 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 TTC23LQ6PF05 361 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 LVRNQ6Q4G3 990 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 ABRAXAS1Q6UWZ7 409 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 XKR5Q6UX68 686 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 WASH2PQ6VEQ5 465 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 UBE2R2Q712K3 238 aaPredicted RBP12.89□□□□□ -0.35
RAP1A-201ENST00000356415 ADAMTSL2Q86TH1 951 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 SDR16C5Q8N3Y7 309 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
RAP1A-201ENST00000356415 ASB11Q8WXH4 323 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 KIAA1191Q96A73 305 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 HIST1H2AHQ96KK5 128 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 GPR78Q96P69 363 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 HIST1H2AJQ99878 128 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 MRPL57Q9BQC6 102 aaKnown RBP12.89□□□□□ -0.35
RAP1A-201ENST00000356415 H2AFJQ9BTM1 129 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 TRIM54Q9BYV2 358 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 KCNH6Q9H252 994 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 SMOC1Q9H4F8 434 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 ALG9Q9H6U8 611 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 WASH6PQ9NQA3 447 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 NKIRAS1Q9NYS0 192 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 PCOLCE2Q9UKZ9 415 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 RNF112Q9ULX5 631 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 PLLPQ9Y342 182 aa12.89□□□□□ -0.35
RAP1A-201ENST00000356415 CCDC189A1A4V9 331 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 NPEPPSL1A6NEC2 478 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 TM9SF1O15321 606 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 SLC16A5O15375 505 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 YY2O15391 372 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 PRPF4O43172 522 aaKnown RBP eCLIP12.88□□□□□ -0.356e-7■■■■□ 23.2
RAP1A-201ENST00000356415 ZWINTO95229 277 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 MATN4O95460 622 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CER1O95813 267 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CATP04040 527 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 RPN2P04844 631 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 F3P13726 295 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CYP2A7P20853 494 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 ACADLP28330 430 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 BNIP3Q12983 259 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CLCA4Q14CN2 919 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 ZNF423Q2M1K9 1284 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CAPRIN2Q6IMN6 1127 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 FRA10AC1Q70Z53 315 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 ANKRD42Q8N9B4 389 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 RHEBL1Q8TAI7 183 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 MAGEC3Q8TD91 643 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 MCOLN3Q8TDD5 553 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 PTERQ96BW5 349 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 C12orf66Q96MD2 445 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 FAM111AQ96PZ2 611 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 GTPBP2Q9BX10 602 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 MRPL46Q9H2W6 279 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 C12orf65Q9H3J6 166 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CPSF2Q9P2I0 782 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 XPR1Q9UBH6 696 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 ADAMTS6Q9UKP5 1117 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 CFAP20Q9Y6A4 193 aaKnown RBP12.88□□□□□ -0.35
RAP1A-201ENST00000356415 KMT2EQ8IZD2 1858 aa12.88□□□□□ -0.35
RAP1A-201ENST00000356415 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 A0A1B0GTQ1 180 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 OR5K4A6NMS3 321 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 SYCE1LA8MT33 242 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 LMO7DNF2Z398 122 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 GFYI3L273 518 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 YKT6O15498 198 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 PSIP1O75475 530 aaKnown RBP12.87□□□□□ -0.35
RAP1A-201ENST00000356415 SLC2A4P14672 509 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 NR1D1P20393 614 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 SLC18A1P54219 525 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 PPP2R2AP63151 447 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 SP140Q13342 867 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 OR4D1Q15615 310 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 TECRLQ5HYJ1 363 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 PLA2G2CQ5R387 149 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 IYDQ6PHW0 289 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 GPSM1Q86YR5 675 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 PHC3Q8NDX5 983 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 ARMC2Q8NEN0 867 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 RMDN2Q96LZ7 410 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 FERD3LQ96RJ6 166 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 SLC12A9Q9BXP2 914 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 UCKL1Q9NWZ5 548 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 UTP6Q9NYH9 597 aaKnown RBP12.87□□□□□ -0.35
RAP1A-201ENST00000356415 SLC17A7Q9P2U7 560 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
RAP1A-201ENST00000356415 OR52A4PA6NMU1 304 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms