RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 TCRBV21S2A2A0A5A6 115 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 PDPK1O15530 556 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 KHDRBS3O75525 346 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 ASPAP45381 313 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 CHIT1Q13231 466 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 CRYBG2Q8N1P7 616 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 CA14Q9ULX7 337 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 FSCN2O14926 492 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 ALOX15BO15296 676 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 APBB3O95704 486 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 SNAI1O95863 264 aaPredicted RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 POLR2JP52435 117 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 RPS15P62841 145 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 PRAMEF14Q5SWL7 426 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 PRAMEF13Q5VWM6 474 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 C10orf107Q8IVU9 208 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 CMTM8Q8IZV2 173 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 BHLHE22Q8NFJ8 381 aaPredicted RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 PLEKHG4BQ96PX9 1271 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 NOL11Q9H8H0 719 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 SCN9AQ15858 1988 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 GABRDO14764 452 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 FFAR2O15552 330 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 DHX15O43143 795 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 LYPLA1O75608 230 aaPredicted RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 ATP1B2P14415 290 aaPredicted RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 DCAF4L2Q8NA75 395 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 PIGXQ8TBF5 258 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 TTYH3Q9C0H2 523 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 PRORSD1PA6NEY8 169 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 STX16-NPEPL1H3BU86 382 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 STX16O14662 325 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 CLCNKAP51800 687 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 TXNDC8Q6A555 127 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 POMZP3Q6PJE2 187 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 B3GALT6Q96L58 329 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 NUAK2Q9H093 628 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 USP29Q9HBJ7 922 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 ANKRD65E5RJM6 399 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 LATS1O95835 1130 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 SERPINA1P01009 418 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 ELAVL3Q14576 367 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 OASLQ15646 514 aaKnown RBP11.09□□□□□ -0.63
FN1-204ENST00000356005 ZNF805Q5CZA5 627 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 MLIPQ5VWP3 458 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 CYP2R1Q6VVX0 501 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 TXNRD2Q9NNW7 524 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 COMMD9Q9P000 198 aa11.09□□□□□ -0.63
FN1-204ENST00000356005 A0A087WXM4 84 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 MPZL2O60487 215 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 TRAPPC6AO75865 159 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 CD63P08962 238 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 RPS24P62847 133 aaKnown RBP11.08□□□□□ -0.63
FN1-204ENST00000356005 DLG1Q12959 904 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 LCP2Q13094 533 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 SERINC3Q13530 473 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 EIF4HQ15056 248 aaKnown RBP11.08□□□□□ -0.63
FN1-204ENST00000356005 ZBTB6Q15916 424 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 SLC9B1Q4ZJI4 515 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 C10orf62Q5T681 223 aaPredicted RBP11.08□□□□□ -0.63
FN1-204ENST00000356005 RASSF6Q6ZTQ3 369 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 OR4K17Q8NGC6 315 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 NKD2Q969F2 451 aaPredicted RBP11.08□□□□□ -0.63
FN1-204ENST00000356005 EFCAB11Q9BUY7 163 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 PTGES2Q9H7Z7 377 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 PCDHGB7Q9Y5F8 929 aa11.08□□□□□ -0.63
FN1-204ENST00000356005 HBQ1P09105 142 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
FN1-204ENST00000356005 NUDT1P36639 197 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 SLC26A3P40879 764 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 HSPA7P48741 367 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 MZT2BQ6NZ67 158 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 PAOXQ6QHF9 649 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 CYP2U1Q7Z449 544 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 CUZD1Q86UP6 607 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 HIC2Q96JB3 615 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 NOD2Q9HC29 1040 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
FN1-204ENST00000356005 KDELR3O43731 214 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 RENP00797 406 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 CAPGP40121 348 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 USP46P62068 366 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 CCDC80Q76M96 950 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 HORMAD2Q8N7B1 307 aa11.08□□□□□ -0.64
FN1-204ENST00000356005 SIDT2Q8NBJ9 832 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms