RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 GTF2IRD2BQ6EKJ0 949 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ZCCHC8Q6NZY4 707 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 KDELC1Q6UW63 502 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 GTF2IRD2Q86UP8 949 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 PHYKPLQ8IUZ5 450 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ZDHHC21Q8IVQ6 265 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CLDN19Q8N6F1 224 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 OR4F6Q8NGB9 312 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SLC13A3Q8WWT9 602 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 S100ZQ8WXG8 99 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 IPPKQ9H8X2 491 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 GPN2Q9H9Y4 310 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 WWOXQ9NZC7 414 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 A0A096LPI6 279 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SLC12A8A0AV02 714 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 DYTNA2CJ06 578 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 AIREO43918 545 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SSX4O60224 188 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 UGT2B11O75310 529 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 EEDO75530 441 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CTPS1P17812 591 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 C21orf33P30042 268 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 HCAR3P49019 387 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 IL2P60568 153 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 EMX2Q04743 252 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CLCA4Q14CN2 919 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 C8orf82Q6P1X6 216 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 MBOAT1Q6ZNC8 495 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SPATA19Q7Z5L4 167 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 NETO1Q8TDF5 533 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ADAMTS16Q8TE57 1224 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 DUS3LQ96G46 650 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CDKN2AIPNLQ96HQ2 116 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 Q96MT0 163 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 DSN1Q9H410 356 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 GIMAP4Q9NUV9 329 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ZNF225Q9UK10 706 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 TPRKBQ9Y3C4 175 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CBX4O00257 560 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 RGS10O43665 173 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PRSS23O95084 383 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 ALDH7A1P49419 539 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 TBX4P57082 545 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 ZXDBP98169 803 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 GRSF1Q12849 480 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PTRHD1Q6GMV3 140 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PM20D1Q6GTS8 502 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 TAPT1Q6NXT6 567 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 LINGO4Q6UY18 593 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 FUBP1Q96AE4 644 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 SLC10A4Q96EP9 437 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 ERVK13-1Q9NX77 482 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 EHD3Q9NZN3 535 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 SCHIP1Q9P0W5 487 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 NINQ8N4C6 2090 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 STX7O15400 261 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 LDB2O43679 373 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 HTR1EP28566 365 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 ATP4BP51164 291 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 RACK1P63244 317 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 UAP1L1Q3KQV9 507 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PIK3R6Q5UE93 754 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 Q6ZSR9 355 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 USP51Q70EK9 711 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PIANPQ8IYJ0 282 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 TSEN34Q9BSV6 310 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 AARSD1Q9BTE6 412 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PARVBQ9HBI1 364 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 NEK6Q9HC98 313 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 USE1Q9NZ43 259 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 INTS6Q9UL03 887 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 ERVK-11Q9UQG0 969 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 DERAQ9Y315 318 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 PMF1-BGLAPU3KQ54 211 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 KRT87PA6NCN2 255 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 UPK1AO00322 258 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 MUSKO15146 869 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 KERAO60938 352 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
TRIM4-203ENST00000355947 APOA1P02647 267 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 CYP11A1P05108 521 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 SERPINF2P08697 491 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 FDXRP22570 491 aa13.37□□□□□ -0.27
TRIM4-203ENST00000355947 MC4RP32245 332 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms