RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 PTBP2Q9UKA9 531 aaKnown RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 CA5BQ9Y2D0 317 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 ARL2BPQ9Y2Y0 163 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 TNPO3Q9Y5L0 923 aaKnown RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 PLXND1Q9Y4D7 1925 aa9.4□□□□□ -0.91
NPHP1-202ENST00000355301 ANKRD12Q6UB98 2062 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 A0A1W2PPC4 97 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 E2F3O00716 465 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 KCNJ13O60928 360 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HIST1H2AGP0C0S8 130 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HIST1H2ADP20671 130 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HTR1BP28222 390 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 AGTR2P50052 363 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 RPL14P50914 215 aaKnown RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HK2P52789 917 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 SF3A3Q12874 501 aaKnown RBP eCLIP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ABRQ12979 859 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PLA2G4EQ3MJ16 856 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PYCR3Q53H96 274 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ANKS6Q68DC2 871 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 RPS27LQ71UM5 84 aaKnown RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 GALNT13Q8IUC8 556 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 WDR75Q8IWA0 830 aaKnown RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 FBXO15Q8NCQ5 510 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 CADM4Q8NFZ8 388 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 OR56A4Q8NGH8 313 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 RFWD2Q8NHY2 731 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 MCOLN3Q8TDD5 553 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 UBTD2Q8WUN7 234 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 C10orf82Q8WW14 230 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 THOC1Q96FV9 657 aaKnown RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HIST1H2AHQ96KK5 128 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 WDR92Q96MX6 357 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 FOPNLQ96NB1 174 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 NECAB3Q96P71 396 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HIST1H2AJQ99878 128 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 EGFL8Q99944 293 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ORAI3Q9BRQ5 295 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 H2AFJQ9BTM1 129 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 FGF22Q9HCT0 170 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 TM7SF3Q9NS93 570 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PNPOQ9NVS9 261 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ARL15Q9NXU5 204 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 MARCOQ9UEW3 520 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PCTPQ9UKL6 214 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 SUFUQ9UMX1 484 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PRSS38A1L453 326 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PRR19A6NJB7 356 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ZNF195O14628 629 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 TNFRSF10CO14798 259 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 TAPBPO15533 448 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 GUCA1CO95843 209 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 CATP04040 527 aaKnown RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ANXA5P08758 320 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 KITP10721 976 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ALOX15P16050 662 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 MPSTP25325 297 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ACADLP28330 430 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HOXA6P31267 233 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 GGT5P36269 586 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 RABIFP47224 123 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 HNMTP50135 292 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 CDH13P55290 713 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 CLCQ05315 142 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 LCP2Q13094 533 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 FBXO48Q5FWF7 155 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 CHST15Q7LFX5 561 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PDZD3Q86UT5 571 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 KIRREL3Q8IZU9 778 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 TCAIMQ8N3R3 496 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ZNF483Q8TF39 744 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 UHRF1Q96T88 793 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 PLCD4Q9BRC7 762 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 MRPL40Q9NQ50 206 aaKnown RBP9.39□□□□□ -0.91
NPHP1-202ENST00000355301 GPR27Q9NS67 375 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 KCNK4Q9NYG8 393 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ZDHHC2Q9UIJ5 367 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 DCTN4Q9UJW0 460 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ACSL5Q9ULC5 683 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 ASB1Q9Y576 335 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 USH1CQ9Y6N9 552 aa9.39□□□□□ -0.91
NPHP1-202ENST00000355301 A0A0G2JND7 137 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 PABPN1LA6NDY0 278 aaKnown RBP9.38□□□□□ -0.91
NPHP1-202ENST00000355301 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 ARHGEF33A8MVX0 844 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 SLCO1B7G3V0H7 640 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 MATN2O00339 956 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 UBFD1O14562 309 aaKnown RBP9.38□□□□□ -0.91
NPHP1-202ENST00000355301 AXIN1O15169 862 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 PI15O43692 258 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 NDUFS2O75306 463 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 MLYCDO95822 493 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 PDGFBP01127 241 aaPredicted RBP9.38□□□□□ -0.91
NPHP1-202ENST00000355301 AOC1P19801 751 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 MAP4P27816 1152 aaKnown RBP9.38□□□□□ -0.91
NPHP1-202ENST00000355301 THOP1P52888 689 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 AQP5P55064 265 aa9.38□□□□□ -0.91
NPHP1-202ENST00000355301 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms