RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MERTKQ12866 999 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 GLYATQ6IB77 296 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 CRTC1Q6UUV9 634 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 B3GNT6Q6ZMB0 384 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 USP45Q70EL2 814 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 ZFP28Q8NHY6 868 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 CAAP1Q9H8G2 361 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 CD320Q9NPF0 282 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 CLEC4EQ9ULY5 219 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 OAZ3Q9UMX2 235 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 LILRB3O75022 631 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 LDLRP01130 860 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 LRG1P02750 347 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 ANXA5P08758 320 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 MYF6P23409 242 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 PPM1AP35813 382 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 CACHD1Q5VU97 1274 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 GPR26Q8NDV2 337 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 NMD3Q96D46 503 aaKnown RBP21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 ECHDC3Q96DC8 303 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 HBEGFQ99075 208 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 BDH2Q9BUT1 245 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 ADI1Q9BV57 179 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 RPF2Q9H7B2 306 aaKnown RBP21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 ASIC5Q9NY37 505 aa21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 INTS6Q9UL03 887 aaKnown RBP21.84■■□□□ 1.09
NKX2-1-201ENST00000354822 KIAA1671Q9BY89 1806 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 MYOCOSA0A1B0GUC4 107 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 NPIPB15A6NHN6 443 aaPredicted RBP21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 ACOX3O15254 700 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 TULP3O75386 442 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 GMNNO75496 209 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 STK16O75716 305 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 SPATA31D3P0C874 917 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 SRCP12931 536 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 ETS2P15036 469 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 AKT1P31749 480 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 KIAA0040Q15053 153 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 SPATA31D4Q6ZUB0 917 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 ZSWIM9Q86XI8 627 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 ULK4Q96C45 1275 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 COPS8Q99627 209 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 CPEB1Q9BZB8 566 aaKnown RBP21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 SLC29A3Q9BZD2 475 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 SUV39H2Q9H5I1 410 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 TUBA8Q9NY65 449 aaPredicted RBP21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 HS3ST2Q9Y278 367 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 AP3M1Q9Y2T2 418 aa21.83■■□□□ 1.09
NKX2-1-201ENST00000354822 OBSL1O75147 1896 aa21.83■■□□□ 1.08
NKX2-1-201ENST00000354822 CCDC160A6NGH7 325 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 PDLIM1O00151 329 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 DLGAP1O14490 977 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 CHRM1P11229 460 aaPredicted RBP21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 HRH2P25021 359 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 GDF5P43026 501 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 RPL38P63173 70 aaKnown RBP21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 SLC36A3Q495N2 470 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 TSPAN33Q86UF1 283 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 TMC8Q8IU68 726 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 FAM47BQ8NA70 645 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 TNIP2Q8NFZ5 429 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 PPM1MQ96MI6 270 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 SMOXQ9NWM0 555 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 SCN8AQ9UQD0 1980 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 A0A1W2PQ67 120 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 IL6P05231 212 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 CDH1P12830 882 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 PCSK2P16519 638 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 IMPG1Q17R60 797 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 KCTD21Q4G0X4 260 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 SLC13A3Q8WWT9 602 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 LMLNQ96KR4 655 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 SH3GL1Q99961 368 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 KLQ9UEF7 1012 aa21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 ZNF490Q9ULM2 529 aaPredicted RBP21.82■■□□□ 1.08
NKX2-1-201ENST00000354822 A8MX80 341 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 TGM5O43548 720 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 DGKQP52824 942 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 OR4D2P58180 307 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 WDR5P61964 334 aaKnown RBP21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 LRRC66Q68CR7 880 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 CCDC149Q6ZUS6 474 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 ELMOD1Q8N336 334 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 USP7Q93009 1102 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 RPL10LQ96L21 214 aaKnown RBP21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 ZNF641Q96N77 438 aaPredicted RBP21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 MCCC1Q96RQ3 725 aaPredicted RBP21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 CHID1Q9BWS9 393 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 DPY30Q9C005 99 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 LRTM1Q9HBL6 345 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 ZFC3H1O60293 1989 aaKnown RBP21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 LOC730098B7Z3J9 87 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 LEFTY2O00292 366 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 EFCAB14O75071 495 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 CLDN9O95484 217 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 KRT6AP02538 564 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 KRT6BP04259 564 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 OR56A5P0C7T3 313 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 GGT5P36269 586 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms