RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CA5AP35218 305 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ARCN1P48444 511 aaKnown RBP10.92□□□□□ -0.66
RTN3-204ENST00000354497 HCAR3P49019 387 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ZNF135P52742 658 aaPredicted RBP10.92□□□□□ -0.66
RTN3-204ENST00000354497 SMTNL2Q2TAL5 461 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 PTCHD3Q3KNS1 767 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 PLEKHS1Q5SXH7 462 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ACAD10Q6JQN1 1059 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ARMC6Q6NXE6 501 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ABRAXAS1Q6UWZ7 409 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 CUZD1Q86UP6 607 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 KMT5CQ86Y97 462 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TRAPPC5Q8IUR0 188 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 GALNT16Q8N428 558 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 CFAP61Q8NHU2 1237 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TIMM29Q9BSF4 260 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TLR10Q9BXR5 811 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 LUC7LQ9NQ29 371 aaKnown RBP10.92□□□□□ -0.66
RTN3-204ENST00000354497 PARVAQ9NVD7 372 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 PSMD13Q9UNM6 376 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 C15orf41Q9Y2V0 281 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 C9J4A7 227 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 PEX12O00623 359 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 TPD52L2O43399 206 aaKnown RBP10.91□□□□□ -0.66
RTN3-204ENST00000354497 LDB2O43679 373 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 KIF5CO60282 957 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 CDK14O94921 469 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 LCA5LO95447 670 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 ZBTB11O95625 1053 aaPredicted RBP10.91□□□□□ -0.66
RTN3-204ENST00000354497 CYP2A7P20853 494 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 ITGA3P26006 1051 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 SERPINB6P35237 376 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 ZBED6P86452 979 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 MAMLD1Q13495 774 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 GTF2H3Q13889 308 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 MYBPC3Q14896 1274 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 TCP11X2Q5H9J9 407 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 AGAP9Q5VTM2 703 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 FAM198BQ6UWH4 519 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 ZNF517Q6ZMY9 492 aaPredicted RBP10.91□□□□□ -0.66
RTN3-204ENST00000354497 CYP4V2Q6ZWL3 525 aaPredicted RBP10.91□□□□□ -0.66
RTN3-204ENST00000354497 SYTL1Q8IYJ3 562 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 D2HGDHQ8N465 521 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 GDAP1Q8TB36 358 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 GLYATL1Q969I3 302 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 FER1L6-AS2Q96M78 137 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 TSC22D3Q99576 134 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 SAMSN1Q9NSI8 373 aaKnown RBP10.91□□□□□ -0.66
RTN3-204ENST00000354497 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.91□□□□□ -0.66
RTN3-204ENST00000354497 HRASLS2Q9NWW9 162 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 TUBA8Q9NY65 449 aaPredicted RBP10.91□□□□□ -0.66
RTN3-204ENST00000354497 SEMA5BQ9P283 1151 aa10.91□□□□□ -0.66
RTN3-204ENST00000354497 PRRC2CQ9Y520 2896 aaKnown RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 AKAP9Q99996 3911 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 RGSL1A5PLK6 1076 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 OR5K3A6NET4 321 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 GPR89AB7ZAQ6 455 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 ANKRD65E5RJM6 399 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 MASP2O00187 686 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 KLHL41O60662 606 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 IPO13O94829 963 aaKnown RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 GPR89BP0CG08 455 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 ABRQ12979 859 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 GALNT3Q14435 633 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 IHHQ14623 411 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 NCF4Q15080 339 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 QPCTQ16769 361 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 FKBP15Q5T1M5 1219 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 MRGPREQ86SM8 312 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 LCA5Q86VQ0 697 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 KCNMB4Q86W47 210 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 OOSP2Q86WS3 158 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 PSTKQ8IV42 348 aaKnown RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 RAVER1Q8IY67 606 aaKnown RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 TEX26Q8N6G2 289 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 GPR26Q8NDV2 337 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 COG1Q8WTW3 980 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 LRFN5Q96NI6 719 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 CSPG4P5Q96PW8 444 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 CD180Q99467 661 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 ZSCAN5AQ9BUG6 496 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 NUP85Q9BW27 656 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 ZNF552Q9H707 407 aaPredicted RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 ZBTB20Q9HC78 741 aaPredicted RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 IMP3Q9NV31 184 aaKnown RBP10.9□□□□□ -0.66
RTN3-204ENST00000354497 PCMTD2Q9NV79 361 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 HAUS2Q9NVX0 235 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 RBM22Q9NW64 420 aaKnown RBP eCLIP10.9□□□□□ -0.66
RTN3-204ENST00000354497 TAS2R14Q9NYV8 317 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 MYO1AQ9UBC5 1043 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 SHOC2Q9UQ13 582 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 PADI2Q9Y2J8 665 aa10.9□□□□□ -0.66
RTN3-204ENST00000354497 A0A1B0GUH1 482 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 OR6C74A6NCV1 312 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 TMEM150CB9EJG8 249 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 E2F3O00716 465 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CBFA2T2O43439 604 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 VEGFDO43915 354 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CEP104O60308 925 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms