RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 K7EPI3 171 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 SLC2A4P14672 509 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 TIMP2P16035 220 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 PSMC3P17980 439 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 RPL38P63173 70 aaKnown RBP15.24■□□□□ 0.03
MBD1-205ENST00000353909 TTLL9Q3SXZ7 439 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 PDCD4Q53EL6 469 aaKnown RBP15.24■□□□□ 0.03
MBD1-205ENST00000353909 ZNF707Q96C28 371 aaPredicted RBP15.24■□□□□ 0.03
MBD1-205ENST00000353909 ZFP14Q9HCL3 533 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 UBAP1Q9NZ09 502 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 CIDEBQ9UHD4 219 aa15.24■□□□□ 0.03
MBD1-205ENST00000353909 NUP214P35658 2090 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 WASH3PC4AMC7 463 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 SGTAO43765 313 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 EEDO75530 441 aaKnown RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 STK16O75716 305 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 DDX6P26196 483 aaKnown RBP eCLIP15.23■□□□□ 0.03
MBD1-205ENST00000353909 OXTRP30559 389 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 DHCR24Q15392 516 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
MBD1-205ENST00000353909 C6orf52Q5T4I8 152 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 FOXB2Q5VYV0 432 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 UBE2R2Q712K3 238 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 RIOK2Q9BVS4 552 aaKnown RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 HEBP1Q9NRV9 189 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 GID8Q9NWU2 228 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 CNOT6Q9ULM6 557 aaKnown RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 TPST1O60507 370 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 CAPNS1P04632 268 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 ATP1B2P14415 290 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 ZNF26P17031 533 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 GSK3BP49841 420 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 PTPN5P54829 565 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 EMX2Q04743 252 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 GRIK2Q13002 908 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 PRKG2Q13237 762 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 GRIN2CQ14957 1233 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 PDK3Q15120 406 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 FAM109BQ6ICB4 259 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 NANOGP8Q6NSW7 305 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 KIAA0907Q7Z7F0 614 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 ZFAND4Q86XD8 727 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 SFTPA1Q8IWL2 248 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 AHI1Q8N157 1196 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 LILRA3Q8N6C8 439 aaPredicted RBP15.23■□□□□ 0.03
MBD1-205ENST00000353909 ADCY4Q8NFM4 1077 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 OR2T34Q8NGX1 318 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 SLC29A1Q99808 456 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 P2RY13Q9BPV8 354 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 FAM83DQ9H4H8 585 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 NANOGQ9H9S0 305 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 ZIM2Q9NZV7 527 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 TBC1D14Q9P2M4 693 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 AURKCQ9UQB9 309 aa15.23■□□□□ 0.03
MBD1-205ENST00000353909 CXorf51AA0A1B0GTR3 108 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 OTOL1A6NHN0 477 aaPredicted RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 OR56A5P0C7T3 313 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 EPB42P16452 691 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 CKMT2P17540 419 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 SLC7A1P30825 629 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 MRPL19P49406 292 aaKnown RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 POLR2LP62875 67 aaKnown RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 EME1Q96AY2 570 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 PPM1MQ96MI6 270 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 CIB1Q99828 191 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 VCXQ9H320 206 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 COQ10BQ9H8M1 238 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 RDH14Q9HBH5 336 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 ZNF490Q9ULM2 529 aaPredicted RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 MRPS23Q9Y3D9 190 aaKnown RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 TCF20Q9UGU0 1960 aaKnown RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 FAM234BA2RU67 622 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 C7orf72A4D263 438 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 FAM149AA5PLN7 773 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 ARPC2O15144 300 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 CYP17A1P05093 508 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 HSD17B1P14061 328 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 EN2P19622 333 aaPredicted RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 NEK2P51955 445 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 LIPEQ05469 1076 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 SELPLGQ14242 412 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 COQ5Q5HYK3 327 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 BRAT1Q6PJG6 821 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 RALGPS2Q86X27 583 aaPredicted RBP15.22■□□□□ 0.03
MBD1-205ENST00000353909 RGL4Q8IZJ4 473 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 CLHC1Q8NHS4 586 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 BTBD9Q96Q07 612 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 CCT7Q99832 543 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 ALG2Q9H553 416 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 PRKAG2Q9UGJ0 569 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 AP4B1Q9Y6B7 739 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 ALPK3Q96L96 1907 aa15.22■□□□□ 0.03
MBD1-205ENST00000353909 PRAMEF4O60810 478 aa15.21■□□□□ 0.03
MBD1-205ENST00000353909 ULK1O75385 1050 aa15.21■□□□□ 0.03
MBD1-205ENST00000353909 ANXA5P08758 320 aa15.21■□□□□ 0.03
MBD1-205ENST00000353909 PRAMEF9Q5VWM5 478 aa15.21■□□□□ 0.03
MBD1-205ENST00000353909 NEK5Q6P3R8 708 aa15.21■□□□□ 0.03
MBD1-205ENST00000353909 UGT2A3Q6UWM9 527 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms