RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GPR45Q9Y5Y3 372 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 OR5K4A6NMS3 321 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TLL1O43897 1013 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 IGFBP5P24593 272 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TIE1P35590 1138 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 KCNC1P48547 511 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 KPNA2P52292 529 aaKnown RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 ZNF33BQ06732 778 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 C16orf62Q7Z3J2 963 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 NCLNQ969V3 563 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 COQ8BQ96D53 544 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 VAT1Q99536 393 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 BARD1Q99728 777 aaKnown RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 NSMCE4AQ9NXX6 385 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 POLG2Q9UHN1 485 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 LEF1Q9UJU2 399 aaPredicted RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.32
IFT88-202ENST00000351808 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.32
IFT88-202ENST00000351808 ZNF487B1APH4 448 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 DPYSL4O14531 572 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ERN1O75460 977 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 EEDO75530 441 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 CDK14O94921 469 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ALPPP05187 535 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 NR3C2P08235 984 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 HOXD4P09016 255 aaPredicted RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 EPHA2P29317 976 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 SOX6P35712 828 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 OSTNP61366 133 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 RCAN2Q14206 197 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 TAF12Q16514 161 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 UNC50Q53HI1 259 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ZNF667Q5HYK9 610 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 IER5Q5VY09 327 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 SLC46A3Q7Z3Q1 461 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 C12orf29Q8N999 325 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ACER1Q8TDN7 264 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 AKAP1Q92667 903 aaKnown RBP eCLIP13.02□□□□□ -0.33
IFT88-202ENST00000351808 EXT2Q93063 718 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 MCCC1Q96RQ3 725 aaPredicted RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 USB1Q9BQ65 265 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 TTLL2Q9BWV7 592 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 MRM3Q9HC36 420 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 MID1IP1Q9NPA3 183 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 A0A087X1B8 175 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 IFNA16P05015 189 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ITGAMP11215 1152 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 GGT1P19440 569 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 SFNP31947 248 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ARL4AP40617 200 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ZFP36L2P47974 494 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 ARHGDIAP52565 204 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 HUNKP57058 714 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 TEKQ02763 1124 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 BTN1A1Q13410 526 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 POU4F3Q15319 338 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 DPP9Q86TI2 863 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 VWA5B2Q8N398 1253 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 REPS1Q96D71 796 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 MYOCQ99972 504 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 MLPHQ9BV36 600 aaPredicted RBP13.02□□□□□ -0.33
IFT88-202ENST00000351808 SPATA9Q9BWV2 254 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 SLC22A4Q9H015 551 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 RNF121Q9H920 327 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 AMBNQ9NP70 447 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 SMPD4Q9NXE4 827 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 POLLQ9UGP5 575 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 ADGRE2Q9UHX3 823 aa13.02□□□□□ -0.33
IFT88-202ENST00000351808 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ANKRD28O15084 1053 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 PIGRP01833 764 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 MAD2L1BPQ15013 274 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 UGP2Q16851 508 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 ZNF678Q5SXM1 525 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 KIF18BQ86Y91 864 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ADHFE1Q8IWW8 467 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 RDH10Q8IZV5 341 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 C11orf54Q9H0W9 315 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 ZNF277Q9NRM2 450 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 KLHL21Q9UJP4 597 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 TSPAN16Q9UKR8 245 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 USP3Q9Y6I4 520 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 A0A087WZ62 844 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 KIAA0513O60268 411 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 FHP07954 510 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 BRCC3P46736 316 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms