RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SLC29A3Q9BZD2 475 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 TRIM15Q9C019 465 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ABCG8Q9H221 673 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 EBF3Q9H4W6 596 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SLC32A1Q9H598 525 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 YY1AP1Q9H869 796 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PDE10AQ9Y233 779 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SLC27A6Q9Y2P4 619 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 AP4S1Q9Y587 144 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 NUP210Q8TEM1 1887 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PABPN1LA6NDY0 278 aaKnown RBP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 A6NHS1 94 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 QSOX1O00391 747 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SMNDC1O75940 238 aaKnown RBP eCLIP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ARHGEF15O94989 841 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 CTSLP07711 333 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 HIST1H2AGP0C0S8 130 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 HIST1H2ADP20671 130 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SLC6A2P23975 617 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SLC7A1P30825 629 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 AQP4P55087 323 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 TLR1Q15399 786 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 TMEM154Q6P9G4 183 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 Q6ZVL8 140 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 DET1Q7L5Y6 550 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SPRED2Q7Z698 418 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ZFAND4Q86XD8 727 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PROKR1Q8TCW9 393 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ASB11Q8WXH4 323 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 HIST1H2AHQ96KK5 128 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 LRRC3BQ96PB8 259 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 HIST1H2AJQ99878 128 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PKP2Q99959 881 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 H2AFJQ9BTM1 129 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ZSCAN5AQ9BUG6 496 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 EFHD1Q9BUP0 239 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 MUC13Q9H3R2 512 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 CMTM6Q9NX76 183 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ARL15Q9NXU5 204 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SCOCQ9UIL1 159 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 CCL27Q9Y4X3 112 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PCDHA9Q9Y5H5 950 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PLXNA2O75051 1894 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 LOC730098B7Z3J9 87 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 FTH1P02794 183 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 HNMTP50135 292 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 HSPA14Q0VDF9 509 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 ZNF284Q2VY69 593 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 HENMT1Q5T8I9 393 aaKnown RBP16.35■□□□□ 0.21
SAMM50-201ENST00000350028 IL23RQ5VWK5 629 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 CYP20A1Q6UW02 462 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 LRRC70Q7Z2Q7 622 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 TRIM46Q7Z4K8 759 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 TECPR1Q7Z6L1 1165 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 LILRA2Q8N149 483 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 TMEM102Q8N9M5 508 aaPredicted RBP16.35■□□□□ 0.21
SAMM50-201ENST00000350028 GOLM1Q8NBJ4 401 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 DDHD1Q8NEL9 900 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 SCAMP4Q969E2 229 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 SAMD11Q96NU1 681 aa16.35■□□□□ 0.21
SAMM50-201ENST00000350028 EIF3LQ9Y262 564 aaKnown RBP16.35■□□□□ 0.21
SAMM50-201ENST00000350028 C15orf38-AP3S2A0A0A6YYH1 394 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 ASPDHA6ND91 283 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 AQP12BA6NM10 295 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 C16orf96A6NNT2 1141 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 MANBAO00462 879 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 ULK1O75385 1050 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 RNASEH2AO75792 299 aaKnown RBP16.34■□□□□ 0.21
SAMM50-201ENST00000350028 CLDN9O95484 217 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 CYP2A7P20853 494 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 IL12AP29459 219 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 MED21Q13503 144 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 CAPRIN1Q14444 709 aaKnown RBP16.34■□□□□ 0.21
SAMM50-201ENST00000350028 PAGE3Q5JUK9 113 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 ERAP2Q6P179 960 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 ARPINQ7Z6K5 226 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 TICAM1Q8IUC6 712 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 APLFQ8IW19 511 aaPredicted RBP16.34■□□□□ 0.21
SAMM50-201ENST00000350028 AQP12AQ8IXF9 295 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 RAVER1Q8IY67 606 aaKnown RBP16.34■□□□□ 0.21
SAMM50-201ENST00000350028 OR2T34Q8NGX1 318 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 OR2T3Q8NH03 318 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 TMEM125Q96AQ2 219 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 VPS33AQ96AX1 596 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 RIOK2Q9BVS4 552 aaKnown RBP16.34■□□□□ 0.21
SAMM50-201ENST00000350028 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 KLQ9UEF7 1012 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 RNF11Q9Y3C5 154 aa16.34■□□□□ 0.21
SAMM50-201ENST00000350028 GFYI3L273 518 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ARNTLO00327 626 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 DNAJA2O60884 412 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 KRT6AP02538 564 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 KRT6BP04259 564 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 G6PDP11413 515 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 SLC2A4P14672 509 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ETV3P41162 512 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 KRT6CP48668 564 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 AP1S2P56377 157 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 EEFSECP57772 596 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms