RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ELMO1Q92556 727 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 REXO5Q96IC2 774 aaKnown RBP18.34■□□□□ 0.53
SCARF1-202ENST00000348987 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 UGT2B28Q9BY64 529 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 KAT8Q9H7Z6 458 aaKnown RBP18.34■□□□□ 0.53
SCARF1-202ENST00000348987 NMUR1Q9HB89 426 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 LIMD1Q9UGP4 676 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 PCDHB14Q9Y5E9 798 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 PDZK1P1A8MUH7 402 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 MITFO75030 526 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-202ENST00000348987 PRKD3O94806 890 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 PARNO95453 639 aaKnown RBP18.34■□□□□ 0.53
SCARF1-202ENST00000348987 OR4Q2P0C623 313 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 ZNF157P51786 506 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-202ENST00000348987 TRAF3Q13114 568 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 CD300LGQ6UXG3 332 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 ZNF566Q969W8 418 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 CCRL2O00421 344 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 CYP11A1P05108 521 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 CYP4B1P13584 511 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 MTHFD2P13995 350 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 CD1DP15813 335 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 PFKLP17858 780 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 PRDX3P30048 256 aaKnown RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 HOXC8P31273 242 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 CLK1P49759 484 aaKnown RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 WNT3AP56704 352 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 SIM2Q14190 667 aaPredicted RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 OR4D1Q15615 310 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 SMN1Q16637 294 aaKnown RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 SNAP47Q5SQN1 464 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 MANEALQ5VSG8 457 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 DLEU7Q6UYE1 221 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 SPATA19Q7Z5L4 167 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 RAB44Q7Z6P3 723 aaPredicted RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 PARP16Q8N5Y8 322 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 BEND7Q8N7W2 519 aaPredicted RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 PROKR1Q8TCW9 393 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 KLHL5Q96PQ7 755 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 REXO4Q9GZR2 422 aaKnown RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 MMP27Q9H306 513 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 DUSP21Q9H596 190 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 ADPRHL2Q9NX46 363 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 SMPD4Q9NXE4 827 aa18.33■□□□□ 0.53
SCARF1-202ENST00000348987 TMEFF2Q9UIK5 374 aaPredicted RBP18.33■□□□□ 0.53
SCARF1-202ENST00000348987 AREL1O15033 823 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
SCARF1-202ENST00000348987 GNASQ5JWF2 1037 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 SDHAF4Q5VUM1 108 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 SCD5Q86SK9 330 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 MICU2Q8IYU8 434 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 SVOPLQ8N434 492 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 ZNF540Q8NDQ6 660 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 CHAC2Q8WUX2 184 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 PYCR2Q96C36 320 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 SLC47A1Q96FL8 570 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 PKMYT1Q99640 499 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 ACOT13Q9NPJ3 140 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 OSER1Q9NX31 292 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 ADGRE2Q9UHX3 823 aa18.33■□□□□ 0.52
SCARF1-202ENST00000348987 A8MV72 311 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-202ENST00000348987 KATNA1O75449 491 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 LCKP06239 509 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 BMP1P13497 986 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ENDOUP21128 410 aaKnown RBP18.32■□□□□ 0.52
SCARF1-202ENST00000348987 DCTP40126 519 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 KRT6CP48668 564 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 FCGRTP55899 365 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 IL1RL1Q01638 556 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 SYT16Q17RD7 645 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 SIGIRRQ6IA17 410 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 NECAB2Q7Z6G3 386 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 PEX5LQ8IYB4 626 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 REM2Q8IYK8 340 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-202ENST00000348987 OR6P1Q8NGX9 317 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 DMRTB1Q96MA1 342 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ACOX2Q99424 681 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ACBD6Q9BR61 282 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ACTR8Q9H981 624 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 QPCTLQ9NXS2 382 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 TPRKBQ9Y3C4 175 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 HS3ST4Q9Y661 456 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 OR51F1A6NGY5 319 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 METTL15A6NJ78 407 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 TBKBP1A7MCY6 615 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 J3KR12 359 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 SLC16A6O15403 523 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 GJB3O75712 270 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 PGLSO95336 258 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 WISP3O95389 354 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-202ENST00000348987 CCR1P32246 355 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 GGT5P36269 586 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 TGFBR2P37173 567 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ZNF135P52742 658 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-202ENST00000348987 GEMP55040 296 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ZNF33AQ06730 810 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 AAK1Q2M2I8 961 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 GDF6Q6KF10 455 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ZCCHC8Q6NZY4 707 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms