RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 QPCTLQ9NXS2 382 aa15.27■□□□□ 0.03
SRPK1-201ENST00000346162 DOT1LQ8TEK3 1739 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 OR2B3O76000 313 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 CHRNA4P43681 627 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 ALDH6A1Q02252 535 aaKnown RBP15.26■□□□□ 0.03
SRPK1-201ENST00000346162 MAB21L1Q13394 359 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 PMS2P3Q13401 168 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF460Q14592 562 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 ARMC6Q6NXE6 501 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 DPY19L3Q6ZPD9 716 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 OOSP2Q86WS3 158 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 CPSF7Q8N684 471 aaKnown RBP15.26■□□□□ 0.03
SRPK1-201ENST00000346162 EPB41L4BQ9H329 900 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 EIF3KQ9UBQ5 218 aaKnown RBP15.26■□□□□ 0.03
SRPK1-201ENST00000346162 ALS2Q96Q42 1657 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 CARNS1A5YM72 827 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 FAM189A1O60320 539 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 IL7RP16871 459 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 PPP2R1BP30154 601 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 FEN1P39748 380 aaKnown RBP15.26■□□□□ 0.03
SRPK1-201ENST00000346162 CCL14Q16627 93 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 HFE2Q6ZVN8 426 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 CACUL1Q86Y37 369 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 HEXDCQ8WVB3 486 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 MYH11P35749 1972 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF132P52740 706 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 UBAP2Q5T6F2 1119 aaKnown RBP15.26■□□□□ 0.03
SRPK1-201ENST00000346162 R3HCC1LQ7Z5L2 792 aaKnown RBP15.26■□□□□ 0.03
SRPK1-201ENST00000346162 ATL1Q8WXF7 558 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 C1GALT1C1Q96EU7 318 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 PEBP4Q96S96 227 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 GPR21Q99679 349 aa15.26■□□□□ 0.03
SRPK1-201ENST00000346162 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 ACSL4O60488 711 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CHRNGP07510 517 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SELPP16109 830 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 FMO3P31513 532 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CLEC6AQ6EIG7 209 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CDC73Q6P1J9 531 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CIR1Q86X95 450 aaPredicted RBP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 FRMD6Q96NE9 622 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 FCRL5Q96RD9 977 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CAPN10Q9HC96 672 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 INTS10Q9NVR2 710 aaKnown RBP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 KPNA5O15131 536 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 GABRR2P28476 465 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CSNK2BP67870 215 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 LYPLAL1Q5VWZ2 237 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 KIAA0930Q6ICG6 404 aaPredicted RBP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 FUT10Q6P4F1 479 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 TAF8Q7Z7C8 310 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 IZUMO1Q8IYV9 350 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SLC34A3Q8N130 599 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SLC7A5P2Q9GIP4 190 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SAV1Q9H4B6 383 aaPredicted RBP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 LTBP3Q9NS15 1303 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CNTN6Q9UQ52 1028 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 TIMM22Q9Y584 194 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 PCDHGC4Q9Y5F7 938 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 KAT6AQ92794 2004 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SYN3O14994 580 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SLC7A4O43246 635 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SPATA31D3P0C874 917 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 IL7P13232 177 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 ALFQ53S48 1182 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SPATA31D4Q6ZUB0 917 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 KBTBD6Q86V97 674 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SPERTQ8NA61 448 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 TRPV1Q8NER1 839 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 TAS2R9Q9NYW1 312 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 PRKAB1Q9Y478 270 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CPQQ9Y646 472 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 UBE2QL1A1L167 161 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 NPEPPSL1A6NEC2 478 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 SLC28A1O00337 649 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CASKO14936 926 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 RPS3P23396 243 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRPK1-201ENST00000346162 RFX3P48380 749 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 WSCD2Q2TBF2 565 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 PGBD2Q6P3X8 592 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 PQLC3Q8N755 202 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 KCTD13Q8WZ19 329 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 MYO19Q96H55 970 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 MAGEH1Q9H213 219 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 ZFYVE1Q9HBF4 777 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 CFL2Q9Y281 166 aa15.25■□□□□ 0.03
SRPK1-201ENST00000346162 MTHFD1P11586 935 aaKnown RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 KCNE1P15382 129 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 FNDC3BQ53EP0 1204 aaKnown RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 DSG4Q86SJ6 1040 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 TRPV3Q8NET8 790 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 CHPT1Q8WUD6 406 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 CUEDC1Q9NWM3 386 aaPredicted RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 ANKMY1Q9P2S6 941 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 SPACA6W5XKT8 324 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 ANKRD34BA5PLL1 514 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms