RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TIMM29Q9BSF4 260 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 DHRS4Q9BTZ2 278 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 TMEM109Q9BVC6 243 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 STRADBQ9C0K7 418 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 POLR1BQ9H9Y6 1135 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 SLC23A2Q9UGH3 650 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 CRYL1Q9Y2S2 319 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 LAMA5O15230 3695 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 ADAMTS20P59510 1910 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 TLX3O43711 291 aaPredicted RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 KRT37O76014 449 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 HAUS5O94927 633 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 AHSGP02765 367 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 HGFP14210 728 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 KRT15P19012 456 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 SAT1P21673 171 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 IDSP22304 550 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 GABRB3P28472 473 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 RBMS1P29558 406 aaKnown RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 CD151P48509 253 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 RTP5Q14D33 572 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 DBN1Q16643 649 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 AARS2Q5JTZ9 985 aaKnown RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 TAOK1Q7L7X3 1001 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 PIM3Q86V86 326 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 C17orf82Q86X59 251 aaPredicted RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 TDRPQ86YL5 185 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 LMNTD2Q8IXW0 634 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 RIBC1Q8N443 379 aaPredicted RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 BEND7Q8N7W2 519 aaPredicted RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 GPATCH11Q8N954 259 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 RASGEF1AQ8N9B8 481 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 WDR36Q8NI36 951 aaKnown RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 ULK4Q96C45 1275 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 NAF1Q96HR8 494 aaKnown RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 RBBP8Q99708 897 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 C19orf43Q9BQ61 176 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 NUDT22Q9BRQ3 303 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 PPCSQ9HAB8 311 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 TMBIM4Q9HC24 238 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 SMOXQ9NWM0 555 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 SCHIP1Q9P0W5 487 aaPredicted RBP13.51□□□□□ -0.25
TPM4-202ENST00000344824 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
TPM4-202ENST00000344824 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 IQANK1A0A1B0GTG1 560 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 TRIM49D1C9J1S8 452 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 CFAP99D6REC4 459 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 B4GAT1O43505 415 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 DUX1O43812 170 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 OR1I1O60431 355 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 CPNE6O95741 557 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 S1PR4O95977 384 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 VIPP01282 170 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 ITGA2BP08514 1039 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 RALBP11234 206 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 MPSTP25325 297 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 ACRV1P26436 265 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 SPRP35270 261 aaPredicted RBP13.5□□□□□ -0.25
TPM4-202ENST00000344824 TTPAP49638 278 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 SERPINB9P50453 376 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 CSE1LP55060 971 aaKnown RBP13.5□□□□□ -0.25
TPM4-202ENST00000344824 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 TYSND1Q2T9J0 566 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 IYDQ6PHW0 289 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 RAB11FIP2Q7L804 512 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 TMPRSS9Q7Z410 1059 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 ZNF438Q7Z4V0 828 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 CROCCP2Q86T23 111 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 ZC3HC1Q86WB0 502 aaKnown RBP13.5□□□□□ -0.25
TPM4-202ENST00000344824 NXPE1Q8N323 547 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 RCBTB1Q8NDN9 531 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 CXorf40BQ96DE9 158 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 SGF29Q96ES7 293 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 SGSM3Q96HU1 749 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 VPS39Q96JC1 886 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 ELMO2Q96JJ3 720 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 NDNQ99608 321 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 SARS2Q9NP81 518 aaKnown RBP13.5□□□□□ -0.25
TPM4-202ENST00000344824 CPNE7Q9UBL6 633 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 DKK4Q9UBT3 224 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 PISDQ9UG56 409 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 ZNF180Q9UJW8 692 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
TPM4-202ENST00000344824 LOXL2Q9Y4K0 774 aa13.5□□□□□ -0.25
TPM4-202ENST00000344824 IGHV1OR21-1A0A087WYE8 117 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 OR52A4PA6NMU1 304 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 PFDN6O15212 129 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 KRT38O76015 456 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 CAPNS1P04632 268 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 SNRPAP09012 282 aaKnown RBP13.49□□□□□ -0.25
TPM4-202ENST00000344824 JMJD7P0C870 316 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 560.6 ms