RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZNF567Q8N184 647 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF461Q8TAF7 563 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 RDH11Q8TC12 318 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PMEPA1Q969W9 287 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 HOXD1Q9GZZ0 328 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 SLC38A1Q9H2H9 487 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 ZDHHC6Q9H6R6 413 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 DHRS12A0PJE2 317 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 DRGXA6NNA5 263 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FTCDO95954 541 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM71Q6P5X7 295 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 Q8N402 240 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 EVPLQ92817 2033 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CARS2Q9HA77 564 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 MYOZ1Q9NP98 299 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 NEU2Q9Y3R4 380 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CFAP43Q8NDM7 1665 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PITPNM1O00562 1244 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 HOXC11O43248 304 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PLOD3O60568 738 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SCAF4O95104 1147 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 MEOX2P50222 304 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 EFCAB12Q6NXP0 572 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GPRIN3Q6ZVF9 776 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC30A8Q8IWU4 369 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF540Q8NDQ6 660 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM248Q9NWD8 314 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RBAKQ9NYW8 714 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GNEQ9Y223 722 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SMLR1H3BR10 107 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CD1EP15812 388 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CORO1AP31146 461 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RHDQ02161 417 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GPS1Q13098 491 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 C10orf62Q5T681 223 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 LRRN1Q6UXK5 716 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GALNT13Q8IUC8 556 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 OR4A15Q8NGL6 344 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZCCHC2Q9C0B9 1178 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GTSE1Q9NYZ3 720 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PCDHA1Q9Y5I3 950 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CYP2D7A0A087X1C5 515 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 LOC105371267A0A1B0GV96 52 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 OR6C70A6NIJ9 312 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC16A3O15427 465 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FADS1O60427 444 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CDH1P12830 882 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CD83Q01151 205 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 IL18Q14116 193 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SMARCD2Q92925 531 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TIMM22Q9Y584 194 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF541Q9H0D2 1346 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SEC14L6B5MCN3 397 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TSPAN15O95858 294 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RYKP34925 604 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RAB35Q15286 201 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 NR6A1Q15406 480 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PARP8Q8N3A8 854 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 YIPF5Q969M3 257 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TMBIM1Q969X1 311 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ASB9Q96DX5 294 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 HSFX1Q9UBD0 423 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ADGRF5Q8IZF2 1346 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 E9PI62 339 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PI15O43692 258 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 POLBP06746 335 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CPT1AP50416 773 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RIN1Q13671 783 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 C9orf131Q5VYM1 1079 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 UNC5DQ6UXZ4 953 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ISCA2Q86U28 154 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 COMMD7Q86VX2 200 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PGAM4Q8N0Y7 254 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 NATD1Q8N6N6 113 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF557Q8N988 423 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 NSMAFQ92636 917 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF778Q96MU6 729 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CDC42EP4Q9H3Q1 356 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ADAMTS1Q9UHI8 967 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PCDHB8Q9UN66 801 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 COL15A1P39059 1388 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ADAMDEC1O15204 470 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ITGAVP06756 1048 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC2A2P11168 524 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 UBA1P22314 1058 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RPL24P83731 157 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 NFKB2Q00653 900 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ELOAQ14241 798 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ASB18Q6ZVZ8 466 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SIAH1Q8IUQ4 282 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FAM160A2Q8N612 972 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 BPIFB1Q8TDL5 484 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TPD52L3Q96J77 140 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 THAP2Q9H0W7 228 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 WNT5BQ9H1J7 359 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 OR51M1Q9H341 326 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 BCO1Q9HAY6 547 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 EIF2B4Q9UI10 523 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PACSIN3Q9UKS6 424 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms