RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 C1orf232A0A0U1RR37 186 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 PFDN6O15212 129 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 PRAMEF1O95521 474 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 PAX3P23760 479 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 IL1RL1Q01638 556 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 FXNQ16595 210 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 THAP5Q7Z6K1 395 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 MSRB3Q8IXL7 192 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 CARNMT1Q8N4J0 409 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 SLC15A4Q8N697 577 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 GTF2H4Q92759 462 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 ACTR8Q9H981 624 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 FAIMQ9NVQ4 179 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 WWOXQ9NZC7 414 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 H0YAE9 185 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 TMEM189-UBE2V1I3L0A0 370 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 PRMT5O14744 637 aaPredicted RBP23.58■■□□□ 1.37
NELFB-201ENST00000343053 TULP3O75386 442 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 CPNE6O95741 557 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 ESR1P03372 595 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 HTR1AP08908 422 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 CRHBPP24387 322 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 PTGER3P43115 390 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 SLC11A1P49279 550 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 KCNAB2Q13303 367 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 SERPINA9Q86WD7 417 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 ZNF548Q8NEK5 533 aaPredicted RBP23.58■■□□□ 1.37
NELFB-201ENST00000343053 C8orf4Q9NR00 106 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 FAM118AQ9NWS6 357 aa23.58■■□□□ 1.37
NELFB-201ENST00000343053 ARIH1Q9Y4X5 557 aaPredicted RBP23.58■■□□□ 1.37
NELFB-201ENST00000343053 KRT87PA6NCN2 255 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 SEC22BO75396 215 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 E2F6O75461 281 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 EOMESO95936 686 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 C1QCP02747 245 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 CAP1Q01518 475 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 GPR17Q13304 367 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 SUSD1Q6UWL2 747 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 BEGAINQ9BUH8 593 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 P2RY12Q9H244 342 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 ARMC7Q9H6L4 198 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 DHRS7Q9Y394 339 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 OTCP00480 354 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 TTKP33981 857 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 MRPL19P49406 292 aaKnown RBP23.57■■□□□ 1.36
NELFB-201ENST00000343053 PLA2G16P53816 162 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 CXorf57Q6NSI4 855 aaKnown RBP23.57■■□□□ 1.36
NELFB-201ENST00000343053 FUT10Q6P4F1 479 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 PIWIL3Q7Z3Z3 882 aaKnown RBP23.57■■□□□ 1.36
NELFB-201ENST00000343053 GALNT5Q7Z7M9 940 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 TRIM74Q86UV6 250 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 TRIM73Q86UV7 250 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 LZICQ8WZA0 190 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 ERLEC1Q96DZ1 483 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 DPY30Q9C005 99 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 CLPBQ9H078 707 aa23.57■■□□□ 1.36
NELFB-201ENST00000343053 AFF4Q9UHB7 1163 aaKnown RBP23.57■■□□□ 1.36
NELFB-201ENST00000343053 OR6C75A6NL08 312 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 STC2O76061 302 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 SLC25A14O95258 325 aaPredicted RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 PARNO95453 639 aaKnown RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 ZDHHC11BP0C7U3 371 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 PRKAR2AP13861 404 aaKnown RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 RHOAP61586 193 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 MRPL58Q14197 206 aaKnown RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 KIAA0040Q15053 153 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 BORCS5Q969J3 196 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CHCHD3Q9NX63 227 aaKnown RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 ZNF490Q9ULM2 529 aaPredicted RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 ST14Q9Y5Y6 855 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 TET1Q8NFU7 2136 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CLDN11O75508 207 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 BCL10O95999 233 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CYP4B1P13584 511 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 GALNT10Q86SR1 603 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 ADAMTSL2Q86TH1 951 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 SPARTQ8N0X7 666 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CHDHQ8NE62 594 aaPredicted RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 ZIC5Q96T25 663 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 RNF38Q9H0F5 515 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 IL17CQ9P0M4 197 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CCL27Q9Y4X3 112 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 C2orf78A6NCI8 922 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 RAD51BO15315 384 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 INPPL1O15357 1258 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 ABCB7O75027 752 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 MYCLP1P12525 358 aaPredicted RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 JAK1P23458 1154 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 FSHRP23945 695 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CD47Q08722 323 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 PCBP2Q15366 365 aaKnown RBP eCLIP23.56■■□□□ 1.364e-9■■■■■ 43.4
NELFB-201ENST00000343053 CPSF6Q16630 551 aaKnown RBP eCLIP23.56■■□□□ 1.36
NELFB-201ENST00000343053 ZNF829Q3KNS6 432 aaPredicted RBP23.56■■□□□ 1.36
NELFB-201ENST00000343053 CNIH3Q8TBE1 160 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CCDC138Q96M89 665 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 ZBTB18Q99592 522 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 ASB8Q9H765 288 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 LATS2Q9NRM7 1088 aa23.56■■□□□ 1.36
NELFB-201ENST00000343053 CXCR6O00574 342 aa23.55■■□□□ 1.36
NELFB-201ENST00000343053 XPNPEP2O43895 674 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms