RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SEMA6CQ9H3T2 930 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 TMEM165Q9HC07 324 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 USP12O75317 370 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 RAD9BQ6WBX8 426 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 PGM2Q96G03 612 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 SDHAF3Q9NRP4 125 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ETS2P15036 469 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 FIGNQ5HY92 759 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 ADGRD2Q7Z7M1 963 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 OR4L1Q8NH43 312 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 ALG2Q9H553 416 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 BOLA2-SMG1P6H3BVE0 249 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 M0R233 179 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 FAM35AQ86V20 835 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF366Q8N895 744 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 AGAP2Q99490 1192 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 KCNS2Q9ULS6 477 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 DOCK9Q9BZ29 2069 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 LCHNA4D1U4 455 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 ZBTB7AO95365 584 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 NDUFB10O96000 172 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 ABHD2P08910 425 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 TIGD6Q17RP2 521 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 TMEM45AQ9NWC5 275 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 GAKO14976 1311 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 RPP30P78346 268 aaKnown RBP17.38■□□□□ 0.37
SMAD4-201ENST00000342988 PDSS1Q5T2R2 415 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 MCOLN2Q8IZK6 566 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 XAGE5Q8WWM1 108 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 RBM47A0AV96 593 aaKnown RBP17.38■□□□□ 0.37
SMAD4-201ENST00000342988 SCDO00767 359 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 RARAP10276 462 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 LINC00471Q8N535 108 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 UROC1Q96N76 676 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 USB1Q9BQ65 265 aaKnown RBP17.38■□□□□ 0.37
SMAD4-201ENST00000342988 GRID2O43424 1007 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 SLC25A3Q00325 362 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 CLIP4Q8N3C7 705 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 SLC41A3Q96GZ6 507 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 HHATLQ9HCP6 504 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 GPRC5BQ9NZH0 403 aa17.38■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF70Q9UC06 446 aaPredicted RBP17.38■□□□□ 0.37
SMAD4-201ENST00000342988 PRORSD1PA6NEY8 169 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 IRF2P14316 349 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 PSMB4P28070 264 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 CDK3Q00526 305 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 TOR1AIP1Q5JTV8 583 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
SMAD4-201ENST00000342988 FCAMRQ8WWV6 532 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 RIPOR3Q96MK2 946 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 EPYCQ99645 322 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 OR51V1Q9H2C8 321 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 INMTO95050 263 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 MMP14P50281 582 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 CTBP2P56545 445 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 TRAM1Q15629 374 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 CES3Q6UWW8 571 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 ATAD1Q8NBU5 361 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 NDC1Q9BTX1 674 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 OR12D3Q9UGF7 316 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 ABL2P42684 1182 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 AGAP11Q8TF27 550 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 GNPDA1P46926 289 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 RBM48Q5RL73 367 aaKnown RBP17.37■□□□□ 0.37
SMAD4-201ENST00000342988 SWT1Q5T5J6 900 aaKnown RBP17.37■□□□□ 0.37
SMAD4-201ENST00000342988 LRFN1Q9P244 771 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 FAM230AA0A1W2PPH8 454 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 CLEC3AO75596 197 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 AMPD1P23109 780 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 AGTR1P30556 359 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 MSANTD2Q6P1R3 559 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF767PQ75MW2 155 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 MKKSQ9NPJ1 570 aaPredicted RBP17.37■□□□□ 0.37
SMAD4-201ENST00000342988 RUVBL1Q9Y265 456 aaKnown RBP17.37■□□□□ 0.37
SMAD4-201ENST00000342988 A0A1W2PRQ8 180 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 RAD51DO75771 328 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 CYP3A4P08684 503 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 TNFRSF8P28908 595 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 GJB7Q6PEY0 223 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 ABHD13Q7L211 337 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 TTLQ8NG68 377 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 IMP3Q9NV31 184 aaKnown RBP17.37■□□□□ 0.37
SMAD4-201ENST00000342988 MIOSQ9NXC5 875 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 COMMD3Q9UBI1 195 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 SHOXO15266 292 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 VIPP01282 170 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 FCER2P06734 321 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 BATFQ16520 125 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF619Q8N2I2 560 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 TAS2R10Q9NYW0 307 aa17.37■□□□□ 0.37
SMAD4-201ENST00000342988 B3GALT2O43825 422 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 MINDY4Q4G0A6 757 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 TMEM145Q8NBT3 493 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 MAPKAP1Q9BPZ7 522 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 ANKHQ9HCJ1 492 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 CD93Q9NPY3 652 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 PTTG2Q9NZH5 202 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 ICKQ9UPZ9 632 aa17.36■□□□□ 0.37
SMAD4-201ENST00000342988 ELOA3DA6NLF2 546 aaPredicted RBP17.36■□□□□ 0.37
SMAD4-201ENST00000342988 ATE1O95260 518 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms