RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SPOCK2Q92563 424 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 ART5Q96L15 291 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 ABCB10Q9NRK6 738 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF180Q9UJW8 692 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 PHF24Q9UPV7 400 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 CPSF4LA6NMK7 179 aaKnown RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 RB1P06400 928 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 APLP1P51693 650 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 JAM2P57087 298 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 LRRTM4Q86VH4 590 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 IGSF9Q9P2J2 1179 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 RGS17Q9UGC6 210 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 MAP2K7O14733 419 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 REM1O75628 298 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 FAUP35544 74 aaKnown RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 ARF5P84085 180 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 NFATC2Q13469 925 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 SYPL2Q5VXT5 272 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 HGSNATQ68CP4 663 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 KIAA0930Q6ICG6 404 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 FBXL22Q6P050 247 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 Q6ZVU0 165 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 TMEM192Q8IY95 271 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 FATE1Q969F0 183 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 MTERF1Q99551 399 aaKnown RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 ZSCAN5AQ9BUG6 496 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 IL1RAPQ9NPH3 570 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 KCND1Q9NSA2 647 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 MTRF1O75570 445 aaKnown RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 KLK3P07288 261 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 ACADLP28330 430 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 NR1H2P55055 460 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 RAB25P57735 213 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 SIM2Q14190 667 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF460Q14592 562 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 FAR1Q8WVX9 515 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 TBL1XR1Q9BZK7 514 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 SLIT3O75094 1523 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 SRRM3A6NNA2 597 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 PEX12O00623 359 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 EFNA1P20827 205 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 KCNJ2P63252 427 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 LIPEQ05469 1076 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 TEAD2Q15562 447 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 B3GNT6Q6ZMB0 384 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 P4HA3Q7Z4N8 544 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 PIGKQ92643 395 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 NTAN1Q96AB6 310 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 A0A0G2JN53 185 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 A8MUA0 341 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A9O60656 530 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A6P19224 532 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A1P22309 533 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A4P22310 534 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 CSTF2P33240 577 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 MPIP34949 423 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A3P35503 534 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 CA9Q16790 459 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 KCTD21Q4G0X4 260 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 EIPR1Q53HC9 387 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 WDR45BQ5MNZ6 344 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 AAGABQ6PD74 315 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 GPR65Q8IYL9 337 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 OR2AP1Q8NGE2 309 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 TRIM63Q969Q1 353 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A7Q9HAW7 530 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A10Q9HAW8 530 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 UGT1A8Q9HAW9 530 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 ITM2CQ9NQX7 267 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 EIF2B3Q9NR50 452 aaKnown RBP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 ZDHHC3Q9NYG2 299 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 A8MU76 341 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 CHRNA4P43681 627 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 NCBP2P52298 156 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE3B-202ENST00000342494 DENND5AQ6IQ26 1287 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 GSTCDQ8NEC7 633 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 PSMA8Q8TAA3 256 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 TP53INP1Q96A56 240 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 NSMCE3Q96MG7 304 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 CYP2S1Q96SQ9 504 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 NDC1Q9BTX1 674 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 BCO2Q9BYV7 579 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 MUC13Q9H3R2 512 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 MED31Q9Y3C7 131 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 AP4B1Q9Y6B7 739 aa14.76□□□□□ -0.05
UBE3B-202ENST00000342494 DBIP07108 87 aaKnown RBP14.75□□□□□ -0.05
UBE3B-202ENST00000342494 ALPIP09923 528 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 PIM1P11309 404 aaPredicted RBP14.75□□□□□ -0.05
UBE3B-202ENST00000342494 SLC11A1P49279 550 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 CLCNKAP51800 687 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 FASTKD3Q14CZ7 662 aaKnown RBP14.75□□□□□ -0.05
UBE3B-202ENST00000342494 AKIRIN2Q53H80 203 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 MLIPQ5VWP3 458 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 CXorf57Q6NSI4 855 aaKnown RBP14.75□□□□□ -0.05
UBE3B-202ENST00000342494 POC5Q8NA72 575 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 OR13C4Q8NGS5 318 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 OR2T34Q8NGX1 318 aa14.75□□□□□ -0.05
UBE3B-202ENST00000342494 OR2AJ1Q8NGZ0 328 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms