RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 GSTM5P46439 218 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 STK19P49842 368 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ZIK1Q3SY52 487 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 RBM20Q5T481 1227 aaKnown RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ERN2Q76MJ5 926 aaKnown RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 LRRC70Q7Z2Q7 622 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 TBC1D21Q8IYX1 336 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 AVL9Q8NBF6 648 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 AGAP11Q8TF27 550 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ZIC5Q96T25 663 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 NRAPQ86VF7 1730 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 HLA-DQA2P01906 255 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 IL6P05231 212 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ITPKBP27987 946 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 AQP1P29972 269 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 TAS2R41P59536 307 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 EIF4HQ15056 248 aaKnown RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 AAK1Q2M2I8 961 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PRAMEF14Q5SWL7 426 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PRAMEF13Q5VWM6 474 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 RALGPS2Q86X27 583 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 FAM46DQ8NEK8 389 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 MUC13Q9H3R2 512 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 MAGEE1Q9HCI5 957 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 SIRPGQ9P1W8 387 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 A0A087WXM4 84 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 A8MT66 165 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 B4DGG1 531 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 CHRNGP07510 517 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PRKCHP24723 683 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 MAGEA10P43363 369 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PTPN5P54829 565 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 SRSF11Q05519 484 aaKnown RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ZNF155Q12901 538 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 TOP3AQ13472 1001 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 DHCR24Q15392 516 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 NEDD8Q15843 81 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PAOXQ6QHF9 649 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 DPY19L3Q6ZPD9 716 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 MAP4K5Q9Y4K4 846 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ARHGEF9O43307 516 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 KLF8O95600 359 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 EDN1P05305 212 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 DNAJB1P25685 340 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 AVPR1BP47901 424 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 NFKB2Q00653 900 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 Q6ZVL8 140 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PIM3Q86V86 326 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 DEPDC4Q8N2C3 294 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ZFRQ96KR1 1074 aaKnown RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 ELOVL7A1L3X0 281 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 LIN7AO14910 233 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 F7P08709 466 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 SLC26A3P40879 764 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 GSCP56915 257 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 NR1D2Q14995 579 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 KHDRBS2Q5VWX1 349 aaKnown RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 REP15Q6BDI9 236 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PRR23BQ6ZRT6 265 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 TFGQ92734 400 aaPredicted RBP19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 Q96MT0 163 aa19.24■□□□□ 0.67
SEMA6C-201ENST00000341697 PM20D1Q6GTS8 502 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 SCAIQ8N9R8 606 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 RAB7BQ96AH8 199 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 VARSP26640 1264 aaKnown RBP19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 DEFB103AP81534 67 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 PRR5P85299 388 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 FOXM1Q08050 763 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 SLBPQ14493 270 aaKnown RBP eCLIP19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 RFX4Q33E94 735 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 TTC9BQ8N6N2 239 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 ZNF248Q8NDW4 579 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 IKZF3Q9UKT9 509 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 MAFKO60675 156 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 SIX3O95343 332 aaPredicted RBP19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 MSX2P35548 267 aaPredicted RBP19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 GRIA2P42262 883 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 RALGDSQ12967 914 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 AMZ1Q400G9 498 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 COMMD2Q86X83 199 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 KIAA2013Q8IYS2 634 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 NXPE1Q8N323 547 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 EEF1AKMT1Q8WVE0 214 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 CLN6Q9NWW5 311 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 hCG_2014768A0A024R1R8 64 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 CPN2P22792 545 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 GALNT18Q6P9A2 607 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 FITM2Q8N6M3 262 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 C11orf65Q8NCR3 313 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 SMPDL3AQ92484 453 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 SLC2A4RGQ9NR83 387 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 PCDHGA4Q9Y5G9 962 aa19.23■□□□□ 0.67
SEMA6C-201ENST00000341697 C9JVG2 144 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 DNAJA2O60884 412 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 TSPAN19P0C672 248 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 KCNA5P22460 613 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 PTDSS1P48651 473 aaKnown RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 LARS2Q15031 903 aaKnown RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 C2CD4AQ8NCU7 369 aaPredicted RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 WDR36Q8NI36 951 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms