RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 CSE1LP55060 971 aaKnown RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 ZFP36L1Q07352 338 aaKnown RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 EIF3IQ13347 325 aaKnown RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 FASTKD3Q14CZ7 662 aaKnown RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 PHF19Q5T6S3 580 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 DUS1LQ6P1R4 473 aaKnown RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 TMEM71Q6P5X7 295 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 WDR74Q6RFH5 385 aaPredicted RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 NAPRTQ6XQN6 538 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 B3GNT8Q7Z7M8 397 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 PLXDC1Q8IUK5 500 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 SLITRK4Q8IW52 837 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 CNTN4Q8IWV2 1026 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 PALM2Q8IXS6 379 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 C2CD4AQ8NCU7 369 aaPredicted RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 FBXO25Q8TCJ0 367 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 SEC14L1Q92503 715 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 NCSTNQ92542 709 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 LIN37Q96GY3 246 aaPredicted RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 NUDT22Q9BRQ3 303 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 WDR83Q9BRX9 315 aaKnown RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 FAM129AQ9BZQ8 928 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 KIR3DX1Q9H7L2 352 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 FAM114A2Q9NRY5 505 aa15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 AKAP7Q9P0M2 348 aaPredicted RBP15.04■□□□□ -0
TNFRSF12A-202ENST00000341627 ITPR1Q14643 2758 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 URB1O60287 2271 aaKnown RBP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 CCDC187A0A096LP49 1063 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 ESYT3A0FGR9 886 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 TLX3O43711 291 aaPredicted RBP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 NIPSNAP2O75323 286 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 GPC4O75487 556 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 MPOP05164 745 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 TYRP1P17643 537 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 CSF2RBP32927 897 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 LEPRP48357 1165 aaKnown RBP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 CARSP49589 748 aaKnown RBP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 LIMK2P53671 638 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 MPP1Q00013 466 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 TRA2AQ13595 282 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 TRADDQ15628 312 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 ZNF789Q5FWF6 425 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 DNTTIP2Q5QJE6 756 aaKnown RBP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 PLEKHS1Q5SXH7 462 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 ZDHHC24Q6UX98 284 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 CEP128Q6ZU80 1094 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 CCDC25Q86WR0 208 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 SLC22A15Q8IZD6 547 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 ACVR1CQ8NER5 493 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 WDR36Q8NI36 951 aaKnown RBP15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 SEMA6CQ9H3T2 930 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 PLAC1Q9HBJ0 212 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 SLC24A2Q9UI40 661 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 ASF1AQ9Y294 204 aa15.03■□□□□ -0
TNFRSF12A-202ENST00000341627 A0A087WV48 116 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 IGHV5-10-1A0A0J9YXX1 117 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 BHMG1C9JSJ3 638 aaPredicted RBP15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 KDM1AO60341 852 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 SLCO2B1O94956 709 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 RPN2P04844 631 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 THRAP10827 490 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 ACADLP28330 430 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 CAPZBP47756 277 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 LSSP48449 732 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 CFHR1Q03591 330 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 MGAT5Q09328 741 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 TTLL9Q3SXZ7 439 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 C3orf38Q5JPI3 329 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 TEDDM1Q5T9Z0 273 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 TRMT10BQ6PF06 316 aaKnown RBP15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 ZNF574Q6ZN55 896 aaPredicted RBP15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 TMPRSS9Q7Z410 1059 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 GALNT7Q86SF2 657 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 LSMEM2Q8N112 164 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 ZBTB2Q8N680 514 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 PHC3Q8NDX5 983 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 KCNJ9Q92806 393 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 CCDC74BQ96LY2 380 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 CMKLR1Q99788 373 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 TRIT1Q9H3H1 467 aaKnown RBP15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 POLR1BQ9H9Y6 1135 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 ZFATQ9P243 1243 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 MTRF1LQ9UGC7 380 aaKnown RBP15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 POLG2Q9UHN1 485 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 CDYLQ9Y232 598 aa15.02■□□□□ -0
TNFRSF12A-202ENST00000341627 HGSO14964 777 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 DXOO77932 396 aaKnown RBP15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 HAUS5O94927 633 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 GSTA2P09210 222 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 ATP5DP30049 168 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 GABREP78334 506 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 ARMC6Q6NXE6 501 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 CNSTQ6PJW8 725 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 UNC5DQ6UXZ4 953 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 RAB11FIP2Q7L804 512 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 OOSP2Q86WS3 158 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 TBC1D21Q8IYX1 336 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 FBXO39Q8N4B4 442 aa15.01□□□□□ -0.01
TNFRSF12A-202ENST00000341627 SKA2Q8WVK7 121 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms