RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 C9P02748 559 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 ANKRD34CP0C6C1 535 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 FMO4P31512 558 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 ADARP55265 1226 aaKnown RBP18.7■□□□□ 0.58
SYNE4-202ENST00000340477 GFERP55789 205 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 WHAMMP3Q1A5X7 153 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 XKR5Q6UX68 686 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 CLEC14AQ86T13 490 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 KCNMB4Q86W47 210 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-202ENST00000340477 C9orf72Q96LT7 481 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 ERP44Q9BS26 406 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 HGH1Q9BTY7 390 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 SRMSQ9H3Y6 488 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.7■□□□□ 0.58
SYNE4-202ENST00000340477 IL1RAPL1Q9NZN1 696 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 EPHA6Q9UF33 1036 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 POLG2Q9UHN1 485 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 PCDHGA7Q9Y5G6 932 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 FAM169AQ9Y6X4 670 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 PMS2P1A4D2B8 440 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 OR5K3A6NET4 321 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 EFCAB7A8K855 629 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CDRT15L2A8MXV6 281 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 RAD51CO43502 376 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 ITIH1P19827 911 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CCR7P32248 378 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 RPL21P46778 160 aaKnown RBP18.69■□□□□ 0.58
SYNE4-202ENST00000340477 RAB15P59190 212 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 DNTTIP2Q5QJE6 756 aaKnown RBP18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CYB5D1Q6P9G0 228 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 NAPRTQ6XQN6 538 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 ZNF572Q7Z3I7 529 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-202ENST00000340477 ARHGAP22Q7Z5H3 698 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 TBC1D21Q8IYX1 336 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 SLC22A15Q8IZD6 547 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 KRT222Q8N1A0 295 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 SKA2Q8WVK7 121 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-202ENST00000340477 KCNE4Q8WWG9 221 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CFAP36Q96G28 342 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 PRR11Q96HE9 360 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CD180Q99467 661 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 DPH5Q9H2P9 285 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 HRASLS2Q9NWW9 162 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 ZC3H7BQ9UGR2 993 aaKnown RBP18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CHMP2BQ9UQN3 213 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 CRYL1Q9Y2S2 319 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 SNX24Q9Y343 169 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 MRFAP1Q9Y605 127 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 WDFY3Q8IZQ1 3526 aa18.69■□□□□ 0.58
SYNE4-202ENST00000340477 OR6C74A6NCV1 312 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 IQCF5A8MTL0 148 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 B4E171 279 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TAF4O00268 1085 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 NVLO15381 856 aaKnown RBP18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TLX3O43711 291 aaPredicted RBP18.68■□□□□ 0.58
SYNE4-202ENST00000340477 CHRM3P20309 590 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 AOAHP28039 575 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TSPAN7P41732 249 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 ELK3P41970 407 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 ARL4DP49703 201 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TUBB2AQ13885 445 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 CACHD1Q5VU97 1274 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TTC23LQ6PF05 361 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 FAM92BQ6ZTR7 304 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 PRSS42Q7Z5A4 293 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 AGGF1Q8N302 714 aaeCLIP18.68■□□□□ 0.58
SYNE4-202ENST00000340477 MNS1Q8NEH6 495 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 LKAAEAR1Q8TD35 194 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 UBXN4Q92575 508 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 FOPNLQ96NB1 174 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TAAR9Q96RI9 348 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 TUBB2BQ9BVA1 445 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 ASPSCR1Q9BZE9 553 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 B3GNT4Q9C0J1 378 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 PPANQ9NQ55 473 aaKnown RBP18.68■□□□□ 0.58
SYNE4-202ENST00000340477 IARS2Q9NSE4 1012 aaKnown RBP18.68■□□□□ 0.58
SYNE4-202ENST00000340477 SLC39A1Q9NY26 324 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 WHRNQ9P202 907 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 PCDHB11Q9Y5F2 797 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 COMMD10Q9Y6G5 202 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 FREM2Q5SZK8 3169 aa18.68■□□□□ 0.58
SYNE4-202ENST00000340477 BANF1O75531 89 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 PKMP14618 531 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 CD82P27701 267 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 SLC5A2P31639 672 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 SHMT2P34897 504 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 EIF2S3P41091 472 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 SLC1A2P43004 574 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 LEPRP48357 1165 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 TTLL9Q3SXZ7 439 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 MSS51Q4VC12 460 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 HSP90AA5PQ58FG0 334 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 CTSL3PQ5NE16 218 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 PLEKHS1Q5SXH7 462 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 DCAF12Q5T6F0 453 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 C8orf74Q6P047 294 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 UNC5DQ6UXZ4 953 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 CENPUQ71F23 418 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 DENND6AQ8IWF6 608 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms