RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR13F1Q8NGS4 319 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 CLPBQ9H078 707 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 TLR9Q9NR96 1032 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 RALGAPA2Q2PPJ7 1873 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 ANKRD66B4E2M5 251 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 AXIN1O15169 862 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ABCB7O75027 752 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 CBFA2T3O75081 653 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 CRHBPP24387 322 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 VBP1P61758 197 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 RELAQ04206 551 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 TAF1AQ15573 450 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 KCNA10Q16322 511 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 PDCD4Q53EL6 469 aaKnown RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 KIAA1841Q6NSI8 718 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 SERINC5Q86VE9 423 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF420Q8TAQ5 688 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 RHNO1Q9BSD3 238 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ACTL8Q9H568 366 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ZIM2Q9NZV7 527 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ELOVL7A1L3X0 281 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 FFAR2O15552 330 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 BCAS1O75363 584 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 SLC25A14O95258 325 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 FKBP9O95302 570 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 IMPDH2P12268 514 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 HOXD9P28356 352 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 CASP9P55211 416 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 PWP1Q13610 501 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 DDX39BQ13838 428 aaKnown RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 TTC23Q5W5X9 447 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 TXNDC11Q6PKC3 985 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 FKBP9P1Q75LS8 142 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 GPR150Q8NGU9 434 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 BPIFB1Q8TDL5 484 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 PYCR2Q96C36 320 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 NUSAP1Q9BXS6 441 aaKnown RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 AMBNQ9NP70 447 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 SLC6A13Q9NSD5 602 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ULK1O75385 1050 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 CLPXO76031 633 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 TSPAN12O95859 305 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 FADS2O95864 444 aaKnown RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 HTR1BP28222 390 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 YBEYP58557 167 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 FAM189BP81408 668 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 XKR7Q5GH72 579 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 MRPL10Q7Z7H8 261 aaKnown RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ADCK1Q86TW2 530 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 PTRH1Q86Y79 214 aaKnown RBP14.14□□□□□ -0.15
CPSF7-201ENST00000340437 NODALQ96S42 347 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ARHGAP39Q9C0H5 1083 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 ASB8Q9H765 288 aa14.14□□□□□ -0.15
CPSF7-201ENST00000340437 K7ERQ8 282 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 UPK1AO00322 258 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 NADKO95544 446 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 PRLP01236 227 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 HOXB8P17481 243 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 TGFBR1P36897 503 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 BCAP31P51572 246 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 AQP6Q13520 282 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 PHKG1Q16816 387 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 LRRC8DQ7L1W4 858 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 ABHD11Q8NFV4 315 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 NETO1Q8TDF5 533 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 SACM1LQ9NTJ5 587 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 LOC100130705A0A1B0GUX0 176 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 LOC730098B7Z3J9 87 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 C1QCP02747 245 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 GGT1P19440 569 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 RHOAP61586 193 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 SMN1Q16637 294 aaKnown RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 TYSND1Q2T9J0 566 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 XAF1Q6GPH4 301 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 EID3Q8N140 333 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 RNF175Q8N4F7 328 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 CHDHQ8NE62 594 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 BARD1Q99728 777 aaKnown RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 ERVK-18Q9QC07 812 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 OPTCQ9UBM4 332 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 OR7A17O14581 309 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 LSM1O15116 133 aaKnown RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 SUOXP51687 545 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 DHRS4L2Q6PKH6 230 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 BEND5Q7L4P6 421 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 ZBTB8BQ8NAP8 495 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-201ENST00000340437 LKAAEAR1Q8TD35 194 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 MCOLN3Q8TDD5 553 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 UBE2FQ969M7 185 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 TAMM41Q96BW9 452 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 BRINP2Q9C0B6 783 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 PARVBQ9HBI1 364 aa14.13□□□□□ -0.15
CPSF7-201ENST00000340437 STX16O14662 325 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ACSL4O60488 711 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 TYMPP19971 482 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 AQP1P29972 269 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 SLC11A2P49281 568 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 LRRC73Q5JTD7 316 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 CLLU1OSQ5K130 101 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms