RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 OR52K2Q8NGK3 314 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 GRIN3AQ8TCU5 1115 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 BLOC1S5Q8TDH9 187 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 BPIFB1Q8TDL5 484 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 UBTD2Q8WUN7 234 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 PPWD1Q96BP3 646 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 PLEKHG4BQ96PX9 1271 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 CIB1Q99828 191 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 CINPQ9BW66 212 aaPredicted RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 NOL11Q9H8H0 719 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 BRD9Q9H8M2 597 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 FBRSL1Q9HCM7 1045 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 DDX18Q9NVP1 670 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 SPATA6Q9NWH7 488 aaPredicted RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 KLHL42Q9P2K6 505 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 SUN2Q9UH99 717 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 TRMT6Q9UJA5 497 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 FBXO4Q9UKT5 387 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 MRPS17Q9Y2R5 130 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 CRYL1Q9Y2S2 319 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 FIS1Q9Y3D6 152 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ARL5AQ9Y689 179 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ANAPC1Q9H1A4 1944 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 A0A1B0GVM2 712 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 OR51F1A6NGY5 319 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 SOCS2O14508 198 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GIPC1O14908 333 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 LAMTOR5O43504 91 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 KATNA1O75449 491 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 TIPRLO75663 272 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 SLC22A3O75751 556 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 DNAJB5O75953 348 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 CPNE6O95741 557 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 F11P03951 625 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 ETS2P15036 469 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 ATP6V1B1P15313 513 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 JUNBP17275 347 aaPredicted RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 HDCP19113 662 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GDI1P31150 447 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 RPS9P46781 194 aaKnown RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 SLC11A2P49281 568 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 POLR2JP52435 117 aaKnown RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 CDH13P55290 713 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 OXCT1P55809 520 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 TAF10Q12962 218 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 MAD2L1Q13257 205 aaPredicted RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 NFYCQ13952 458 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GK3PQ14409 553 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GRB7Q14451 532 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 NRF1Q16656 503 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 C10orf120Q5SQS8 335 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 PAQR3Q6TCH7 311 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 ABRAXAS1Q6UWZ7 409 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GLT6D1Q7Z4J2 308 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GPR141Q7Z602 305 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 HID1Q8IV36 788 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 DDIASQ8IXT1 998 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 TTC30BQ8N4P2 665 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 FAM47BQ8NA70 645 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GLB1L3Q8NCI6 653 aaPredicted RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 OR13C4Q8NGS5 318 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 FAM81AQ8TBF8 368 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 CD200R1Q8TD46 325 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 GAB3Q8WWW8 586 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 IRF7Q92985 503 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 RSPRY1Q96DX4 576 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 BDH2Q9BUT1 245 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 OSBPL10Q9BXB5 764 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 ADGRE3Q9BY15 652 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 UNKQ9C0B0 810 aaKnown RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 ZNF334Q9HCZ1 680 aaPredicted RBP10.6□□□□□ -0.71
RTN3-201ENST00000338850 TRPV5Q9NQA5 729 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 SMOXQ9NWM0 555 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 DNMT3LQ9UJW3 386 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 STOML2Q9UJZ1 356 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 PCDHGB4Q9UN71 923 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 KCTD3Q9Y597 815 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 PCDHGB5Q9Y5G0 923 aa10.6□□□□□ -0.71
RTN3-201ENST00000338850 COL4A2P08572 1712 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 ASPDHA6ND91 283 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 CCDC154A6NI56 674 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 HEPACAM2A8MVW5 462 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 NPIPB8E9PQR5 432 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 EIF3FO00303 357 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 E2F3O00716 465 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 MAN2B1O00754 1011 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 TLR5O60602 858 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 DEAF1O75398 565 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 CRCPO75575 148 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 SIX3O95343 332 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 LDLRP01130 860 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 PRLP01236 227 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 SLC4A1P02730 911 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 CDK4P11802 303 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 DCKP27707 260 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 ACVRL1P37023 503 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms