RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 HSPA7P48741 367 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 RASSF2P50749 326 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 GTF2H2Q13888 395 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 IRF4Q15306 451 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 GTF2H2CQ6P1K8 395 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 C11orf96Q7Z7L8 435 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 HORMAD1Q86X24 394 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 TCAIMQ8N3R3 496 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 CPSF7Q8N684 471 aaKnown RBP15.13■□□□□ 0.01
LIMS1-202ENST00000338045 SKA2Q8WVK7 121 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-202ENST00000338045 ASB12Q8WXK4 309 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 GUCD1Q96NT3 240 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 NUSAP1Q9BXS6 441 aaKnown RBP15.13■□□□□ 0.01
LIMS1-202ENST00000338045 ARHGEF3Q9NR81 526 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 ARL15Q9NXU5 204 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 WWOXQ9NZC7 414 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 STK38LQ9Y2H1 464 aa15.13■□□□□ 0.01
LIMS1-202ENST00000338045 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 GPR89AB7ZAQ6 455 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 K7EPI3 171 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 OR7A17O14581 309 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 HIST1H2AGP0C0S8 130 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 GPR89BP0CG08 455 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 NDUFV2P19404 249 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 NCF2P19878 526 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 HIST1H2ADP20671 130 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 CD72P21854 359 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 PREPP48147 710 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 HNMTP50135 292 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 PLOD1Q02809 727 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 SFSWAPQ12872 951 aaKnown RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 CDC16Q13042 620 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 INPP5AQ14642 412 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 MLF2Q15773 248 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 ICE2Q659A1 982 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 GPR153Q6NV75 609 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 MBOAT1Q6ZNC8 495 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 GPRIN3Q6ZVF9 776 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 CHCHD4Q8N4Q1 142 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 OR52B6Q8NGF0 335 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 OR2L2Q8NH16 312 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 MCOLN3Q8TDD5 553 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 TWIST2Q8WVJ9 160 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 C19orf60Q96EN9 201 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 HIST1H2AHQ96KK5 128 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 KCNA7Q96RP8 456 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 HIST1H2AJQ99878 128 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 H2AFJQ9BTM1 129 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 LGR4Q9BXB1 951 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 SLC17A9Q9BYT1 436 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 NOL11Q9H8H0 719 aaKnown RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 KLC4Q9NSK0 619 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 DUSP12Q9UNI6 340 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 NCKAP1Q9Y2A7 1128 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 DCXO43602 365 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 POP7O75817 140 aaKnown RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 UROSP10746 265 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 PDHA2P29803 388 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 PBLDP30039 288 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 ADSLP30566 484 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 CCR3P51677 355 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 SGCGQ13326 291 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 RBBP7Q16576 425 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 ZXDCQ2QGD7 858 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 FAM219BQ5XKK7 198 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 CHSY3Q70JA7 882 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 LARP4Q71RC2 724 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 ZNF687Q8N1G0 1237 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 TEX9Q8N6V9 391 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 HM13Q8TCT9 377 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 C1QTNF7Q9BXJ2 289 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 OSBPL6Q9BZF3 934 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 TUBB1Q9H4B7 451 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 WDR26Q9H7D7 661 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 OPTCQ9UBM4 332 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 FAM8A1Q9UBU6 413 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 TAGLN3Q9UI15 199 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 TMEM98Q9Y2Y6 226 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 PCYT1BQ9Y5K3 369 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-202ENST00000338045 CAPN7Q9Y6W3 813 aa15.12■□□□□ 0.01
LIMS1-202ENST00000338045 MGAT4DA6NG13 374 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 ARHGEF33A8MVX0 844 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 GIPC1O14908 333 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 SLC22A2O15244 555 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 STK16O75716 305 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 OTCP00480 354 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 ESRRAP11474 423 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-202ENST00000338045 PTPN4P29074 926 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 GDF5P43026 501 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 SLC6A12P48065 614 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 ERVPABLB-1P60509 514 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 TRAF3Q13114 568 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.11■□□□□ 0.01
LIMS1-202ENST00000338045 LETMD1Q6P1Q0 360 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 EFL1Q7Z2Z2 1120 aaKnown RBP15.11■□□□□ 0.01
LIMS1-202ENST00000338045 CFAP206Q8IYR0 622 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 FBXO15Q8NCQ5 510 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-202ENST00000338045 C3orf30Q96M34 536 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 DPEP2Q9H4A9 486 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 IPPKQ9H8X2 491 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms