RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PREPP48147 710 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 CD151P48509 253 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 PRLHRP49683 370 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 PMS2P54278 862 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 XIAPP98170 497 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 GSTM4Q03013 218 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 UBAP2LQ14157 1087 aaKnown RBP10.37□□□□□ -0.75
CAPN3-202ENST00000337571 UGT8Q16880 541 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 COLEC12Q5KU26 742 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 CERS6Q6ZMG9 384 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 PEX26Q7Z412 305 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 TMEM135Q86UB9 458 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 APLFQ8IW19 511 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-202ENST00000337571 NAT14Q8WUY8 206 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 N4BP2L2Q92802 583 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-202ENST00000337571 ZNF501Q96CX3 271 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-202ENST00000337571 RMDN2Q96LZ7 410 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 GORASP1Q9BQQ3 440 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 MVB12BQ9H7P6 319 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 ARNT2Q9HBZ2 717 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 G3BP2Q9UN86 482 aaKnown RBP10.37□□□□□ -0.75
CAPN3-202ENST00000337571 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 F8W8V4 182 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 MEN1O00255 615 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 LDB2O43679 373 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 TPH1P17752 444 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 CYP2A7P20853 494 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 ACRV1P26436 265 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 PRDX3P30048 256 aaKnown RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 KPNA2P52292 529 aaKnown RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 ZNF140P52738 457 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 CACNG1Q06432 222 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 KIF5AQ12840 1032 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 RPA4Q13156 261 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 SEMA5AQ13591 1074 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 P3H1Q32P28 736 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 LINC00523Q86TU6 105 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 SERPINA9Q86WD7 417 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 AMIGO1Q86WK6 493 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 FAM71DQ8N9W8 422 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 PHC3Q8NDX5 983 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 STYXQ8WUJ0 223 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 MRFAP1L1Q96HT8 127 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 TTC1Q99614 292 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 TLR10Q9BXR5 811 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 TFB2MQ9H5Q4 396 aaKnown RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 LRRC40Q9H9A6 602 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 COG4Q9H9E3 785 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 AKIRIN1Q9H9L7 192 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 ACSS2Q9NR19 701 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 LATS2Q9NRM7 1088 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 NLE1Q9NVX2 485 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 SMARCAL1Q9NZC9 954 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 POMT2Q9UKY4 750 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 BTRCQ9Y297 605 aa10.36□□□□□ -0.75
CAPN3-202ENST00000337571 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
CAPN3-202ENST00000337571 TTLL8A6PVC2 850 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 C2orf74A8MZ97 194 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 MIF4GDA9UHW6 222 aaKnown RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 QSOX1O00391 747 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 CCL22O00626 93 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 SGTAO43765 313 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 KDM1AO60341 852 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 AP2A2O94973 939 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 HBQ1P09105 142 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 NR1D1P20393 614 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 AGXTP21549 392 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 NSG1P42857 185 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 LMAN1P49257 510 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 CDKN1CP49918 316 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 CCL11P51671 97 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 ZNF75DP51815 510 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 PGDP52209 483 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 VAV2P52735 878 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 RPS18P62269 152 aaKnown RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 GPS2Q13227 327 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 PRKG2Q13237 762 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 MSLNQ13421 630 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 LAMB3Q13751 1172 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 POU6F1Q14863 301 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 IZUMO3Q5VZ72 239 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 DENND5AQ6IQ26 1287 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 AADACL2Q6P093 401 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 FBXO38Q6PIJ6 1188 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 GPR135Q8IZ08 494 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 LILRA3Q8N6C8 439 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 CLDN19Q8N6F1 224 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 DNAAF3Q8N9W5 541 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 ALG3Q92685 438 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 TFGQ92734 400 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 CDKN2AIPNLQ96HQ2 116 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 DNAJC1Q96KC8 554 aaKnown RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 LRFN5Q96NI6 719 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 SLC25A23Q9BV35 468 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 LACRTQ9GZZ8 138 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 CHST8Q9H2A9 424 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 ACTR5Q9H9F9 607 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-202ENST00000337571 SNX7Q9UNH6 387 aa10.35□□□□□ -0.75
CAPN3-202ENST00000337571 IGLV3-16A0A075B6K0 115 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 GRID2IPA4D2P6 1211 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms