RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SKA2Q8WVK7 121 aaPredicted RBP21.03■□□□□ 0.96
TPM1-204ENST00000334895 ASB11Q8WXH4 323 aa21.03■□□□□ 0.96
TPM1-204ENST00000334895 SKA1Q96BD8 255 aa21.03■□□□□ 0.96
TPM1-204ENST00000334895 MRPL57Q9BQC6 102 aaKnown RBP21.03■□□□□ 0.96
TPM1-204ENST00000334895 MRPL46Q9H2W6 279 aaKnown RBP21.03■□□□□ 0.96
TPM1-204ENST00000334895 ACSL5Q9ULC5 683 aa21.03■□□□□ 0.96
TPM1-204ENST00000334895 SNX11Q9Y5W9 270 aa21.03■□□□□ 0.96
TPM1-204ENST00000334895 GPR179Q6PRD1 2367 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 EML2O95834 649 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 DHRS4L1P0CG22 281 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 CHN1P15882 459 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 HOXD12P35452 270 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 PHKG1Q16816 387 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 CCDC153Q494R4 210 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 SLC30A9Q6PML9 568 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 PDZD3Q86UT5 571 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 SUMF1Q8NBK3 374 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 RHEBL1Q8TAI7 183 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 ZDHHC5Q9C0B5 715 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 WWP1Q9H0M0 922 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 PRDM8Q9NQV8 689 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 TBC1D29Q9UFV1 150 aa21.02■□□□□ 0.96
TPM1-204ENST00000334895 ANKRD12Q6UB98 2062 aa21.02■□□□□ 0.95
TPM1-204ENST00000334895 G3V2L1 256 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 GFYI3L273 518 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 KERAO60938 352 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 RBP1P09455 135 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 IDSP22304 550 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 ACTR1BP42025 376 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 DPP6P42658 865 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 KPNA2P52292 529 aaKnown RBP21.01■□□□□ 0.95
TPM1-204ENST00000334895 ACTR1AP61163 376 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 ILF3Q12906 894 aaKnown RBP eCLIP21.01■□□□□ 0.95
TPM1-204ENST00000334895 C1orf61Q13536 156 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 PRRT3Q5FWE3 981 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 CAPRIN2Q6IMN6 1127 aaKnown RBP21.01■□□□□ 0.95
TPM1-204ENST00000334895 FAM76AQ8TAV0 307 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 ERVMER34-1Q9H9K5 563 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 FSCN3Q9NQT6 498 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 NKIRAS1Q9NYS0 192 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 PCDH15Q96QU1 1955 aa21.01■□□□□ 0.95
TPM1-204ENST00000334895 A6NCN8 305 aa21■□□□□ 0.95
TPM1-204ENST00000334895 PATE3B3GLJ2 98 aa21■□□□□ 0.95
TPM1-204ENST00000334895 PSIP1O75475 530 aaKnown RBP21■□□□□ 0.95
TPM1-204ENST00000334895 MTHFD2P13995 350 aa21■□□□□ 0.95
TPM1-204ENST00000334895 CLCA4Q14CN2 919 aa21■□□□□ 0.95
TPM1-204ENST00000334895 ADAMTSL2Q86TH1 951 aa21■□□□□ 0.95
TPM1-204ENST00000334895 STAG3L4Q8TBR4 150 aa21■□□□□ 0.95
TPM1-204ENST00000334895 CAPN10Q9HC96 672 aa21■□□□□ 0.95
TPM1-204ENST00000334895 SCHIP1Q9P0W5 487 aaPredicted RBP21■□□□□ 0.95
TPM1-204ENST00000334895 LAMA1P25391 3075 aa21■□□□□ 0.95
TPM1-204ENST00000334895 OTOGLQ3ZCN5 2332 aa21■□□□□ 0.95
TPM1-204ENST00000334895 ARHGEF17Q96PE2 2063 aaPredicted RBP21■□□□□ 0.95
TPM1-204ENST00000334895 SNX2O60749 519 aa21■□□□□ 0.95
TPM1-204ENST00000334895 EPN2O95208 641 aa21■□□□□ 0.95
TPM1-204ENST00000334895 CTSEP14091 401 aa21■□□□□ 0.95
TPM1-204ENST00000334895 DUOXA1Q1HG43 343 aa21■□□□□ 0.95
TPM1-204ENST00000334895 EEF1AKMT2Q5JPI9 291 aaKnown RBP21■□□□□ 0.95
TPM1-204ENST00000334895 UBE2R2Q712K3 238 aaPredicted RBP21■□□□□ 0.95
TPM1-204ENST00000334895 CFAP61Q8NHU2 1237 aa21■□□□□ 0.95
TPM1-204ENST00000334895 INSM2Q96T92 566 aaPredicted RBP21■□□□□ 0.95
TPM1-204ENST00000334895 SLC12A9Q9BXP2 914 aa21■□□□□ 0.95
TPM1-204ENST00000334895 GSDMCQ9BYG8 508 aa21■□□□□ 0.95
TPM1-204ENST00000334895 CNOT10Q9H9A5 744 aaKnown RBP21■□□□□ 0.95
TPM1-204ENST00000334895 PCOLCE2Q9UKZ9 415 aa21■□□□□ 0.95
TPM1-204ENST00000334895 RAB23Q9ULC3 237 aa21■□□□□ 0.95
TPM1-204ENST00000334895 RNF112Q9ULX5 631 aa21■□□□□ 0.95
TPM1-204ENST00000334895 PDE10AQ9Y233 779 aa21■□□□□ 0.95
TPM1-204ENST00000334895 FRYLO94915 3013 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 ADAMTS9Q9P2N4 1935 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 CCDC189A1A4V9 331 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 KRT87PA6NCN2 255 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 NEMP2A6NFY4 417 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 PDZK1P1A8MUH7 402 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 ARHGEF33A8MVX0 844 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 PROB1E7EW31 1015 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 UBXN8O00124 270 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 LMNAP02545 664 aaKnown RBP20.99■□□□□ 0.95
TPM1-204ENST00000334895 C8GP07360 202 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 SLC35G4P0C7Q5 338 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 SERPINB4P48594 390 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 GYS2P54840 703 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 GRIK2Q13002 908 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 SP140Q13342 867 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 PCLAFQ15004 111 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 SHBQ15464 509 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 UAP1L1Q3KQV9 507 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 ABRAXAS1Q6UWZ7 409 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 WASH2PQ6VEQ5 465 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 ARFGAP2Q8N6H7 521 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 CCDC63Q8NA47 563 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 EXT2Q93063 718 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 LOXL4Q96JB6 756 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 MECRQ9BV79 373 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 WASH6PQ9NQA3 447 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 UTP6Q9NYH9 597 aaKnown RBP20.99■□□□□ 0.95
TPM1-204ENST00000334895 TAAR2Q9P1P5 351 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 COPG2Q9UBF2 871 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 OARD1Q9Y530 152 aa20.99■□□□□ 0.95
TPM1-204ENST00000334895 CFAP20Q9Y6A4 193 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms